rassf9 (rassf9)


Basic Information

Item Value
gene id rassf9
gene name rassf9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 91582584 ~ 91591130 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036958969.1
GCTATGACAAGCGTTCCGATTTGGGACAGTGTTCAACTTTTTGGTGAGTGACAAACCTACACCAGTTTGTGAAAAAGTCACGGACGTCCTGCAATGCAGTGGCTGTAACCCATTTTGGCAGCATTTTGGATAATTGTGTTTCAGTTGAGCGGCTTGCTATGGCTCCATTCGGGAAGAACTTTCTGAAAGCGCGTTTGAAAAACAGAGCGAAGGACAAAGATGACAAGGAAACTGTGCTAGGAAAGGAGATccaggtgtctgtgtgtgatgaggAGAAGGTGGTGTGCGGTGTCACCAAACACACAACGTGTGCTGACATAGTGCAGGCCTTGCTGGACGACCACAAGACCATCCCTGAGAACAAGAAAATTCTGCATGGCGACCCTAAAGACTTCTGCCTGCTAGAGCGCTGGAAAGGCTTTGAGAGGGCTCTGCCCCCATTAACCCGCATCCTCAGGCTATGGAATGCCTGGGGAGACCAGCGACCGTTCATCCAGTTCACCCTGGTCAAGGCCAGCGATTTTGTACCCCAAGCAGGCTGCAAGAAGGGGGCCAAATTAAAGGGGGCTAAGGGGGCTAAGAGATGGGAGCAAGGCCCGGCCCAGTACTCCCAGTCACTGCCAGTGGAGAGACAGAAACGGATGGTGAAGAAGGCCTTCAGGAAGCTGGAGAAGATCCACAAGGAGAAGAGGGTAGTGGGATCTtctccgggcagcgaggagataGACAGGATGGTTCAGCTGCTTATCCAACAGGACCACACCATCCGGCATCAGATCCAGAGGATGAGGGAGCTGGACTGTGAGATGGAACGCTTCGAGATGGAGCTGCAGGGAGGACAACAGGATACAGAGCTTCTCCATGAGGGATTCTCCTCACTCTCCCCGATCTCCTTCCCCCACAGCCACAACCAGAACCTGGACAGCCAGCCAGGGGTTTCAGAGCaggagctgctgcaggagtgcGTGTATACTAGTGACAGTGTGGCCCAGTTGGAGATGCAGCTGCTCAGGCACGAGGAGCTTATAGCCCAACTGTCCCAGGACATCGATGTAGAGCTGACGAGGGCCATGTTAATGTTGCCGGAGGTCCCCGACAAGGATACTCAGTTACAGGGGGCAGCGGCAGGAGTAACTTCTGACCCAGACCTGTCCTGGGAAGCGGCAGAACTGGAGAGACTGCAGGCCGAACTGAGGCTTAGTCTGCGCACCGGCGTGTCCCTTCACATCCAAACGGCCCAGCTGGAGAAGGAGCTGAAGGGCTATGAATCCACACTGTTCTCCAAGGACCAGGATTGCTGGCAGCTGGCTTCCCAGCTGAGCACACTGCAGGTGGGGGACAGCGTGCAGGAAACGCCTAGGCTCGGGACTATGAAATGCCCGGCCCCATGCATTGTTCCACAGGCAGTGAGACTGAAACACAGCCTGTCCCCTACAGATGTTACAGACACAGACTCAGACACAGGGATCAGCTCAACACACAGTCAGGACTCACTGTCTCCTTGTCTGGACATGATCCTGCCACCGCTGGACACTGATGTCTGAGATGTCTGCCTCTCTGGATTCCCCTCAGAAGGCAATACACAATCCCGCTATATGCACTATTTGCCTGGCGGACTAATTTGATACTGTATTAATCATTGAGTTACACTGACACATTTGCTACTTCAAATGATAATAGTATTTTCTTACTATTCCTACTTTTGACGTGCCCATTGCATGACACTTCATTAAGTATTAATAGATTGACcaaaacacaaaacataaaaTGATTGTTTTATATTAAAATGGTCTGCCTTTGTTATAAACTGTAAACCATTATCTATTCAGATTTTCTTCATAAGCTATAAGATATAATGTCACAGAGATTCATCAAAATGACAAAAGAACAATGAGATGTAAGGGAAAACTATATTTATTTGTGTTCTTGTTTTGGAGCATTAGACTATTTGTTACTGTATGTTTATATACATTCCAAAAGCATATGAAGCCAAACTCTACATTTCTCAATATGTGTGCAGGTAGTCACTATCATTAATGTAATATGAAAGCCATTTaagctataaaaaaaaatatatatatatatatataaatgtacatTCTTTACTGCAACAATAAAGGCATGTTTCTTA

Function

symbol description
rassf9 Predicted to act upstream of or within endosomal transport and signal transduction. Orthologous to human RASSF9 (Ras association domain family member 9).

NR:

description
ras association domain-containing protein 9

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036958969.1 True 2131 mRNA 0.48 2 91582584 91591130

Neighbor

gene id symbol gene type direction distance location
mgat4c LOC106561589 coding upstream 38819 91366282 ~ 91543765 (+)
LOC110499641 LOC106561583 coding upstream 342847 91235465 ~ 91239737 (+)
cep290 cep290 coding upstream 369315 91157461 ~ 91213269 (+)
kitlga LOC106561562 coding upstream 611266 90938346 ~ 90971318 (+)
si:dkey-106n21.1 LOC106561561 coding upstream 714259 90793248 ~ 90868325 (+)
slc6a15 LOC106561596 coding downstream 163829 91754959 ~ 91779981 (+)
LOC110499735 LOC106561597 coding downstream 245684 91836814 ~ 91852352 (+)
LOC110502363 LOC106561595 coding downstream 262722 91853852 ~ 91933354 (+)
LOC110502371 LOC106561599 coding downstream 346022 91937152 ~ 92008067 (+)
smc1b LOC106561601 coding downstream 437304 92028434 ~ 92049230 (+)
G203281 NA non-coding upstream 169036 91412013 ~ 91413548 (+)
G203251 NA non-coding upstream 213581 91368559 ~ 91369003 (+)
G203197 NA non-coding upstream 302625 91279751 ~ 91279959 (+)
G202844 NA non-coding upstream 327795 91252360 ~ 91254789 (+)
G203415 NA non-coding downstream 27232 91618362 ~ 91644022 (+)
G203503 NA non-coding downstream 177630 91768760 ~ 91769152 (+)
G203547 NA non-coding downstream 231189 91822319 ~ 91823796 (+)
G203559 NA non-coding downstream 262083 91853213 ~ 91853577 (+)
G203579 NA non-coding downstream 270263 91861393 ~ 91861963 (+)
G202185 NA other upstream 865163 90716942 ~ 90717421 (+)
G202039 NA other upstream 1135011 90447118 ~ 90447573 (+)
LOC110499234 rbl2 other upstream 2160146 89395057 ~ 89422438 (+)
G203414 NA other downstream 30871 91622001 ~ 91624293 (+)
G203438 LOC106561592 other downstream 77706 91668836 ~ 91671899 (+)
G203551 NA other downstream 235719 91826849 ~ 91847400 (+)
G203646 cpa2 other downstream 430625 92021755 ~ 92024742 (+)
G204240 ckap5 other downstream 566145 92157275 ~ 92159903 (+)

Expression


Co-expression Network