Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499699 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 91606745 ~ 91624204 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002469996.2 | True | 886 | mRNA | 0.42 | 3 | 91606745 | 91624204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| nts | LOC106561634 | coding | downstream | 25439 | 91560700 ~ 91581306 (-) |
| eif4g2b | LOC106561567 | coding | downstream | 351904 | 91239744 ~ 91254841 (-) |
| lyve1b | LOC106561566 | coding | downstream | 376541 | 91227098 ~ 91230204 (-) |
| c2h12orf29 | cssa10h12orf29 | coding | downstream | 387175 | 91214667 ~ 91219570 (-) |
| tmtc3 | tmtc3 | coding | downstream | 449302 | 91046731 ~ 91157443 (-) |
| alx1 | LOC106561592 | coding | upstream | 44193 | 91668397 ~ 91673730 (-) |
| lrriq1 | lrriq1 | coding | upstream | 67649 | 91691853 ~ 91740829 (-) |
| lrrk2 | lrrk2 | coding | upstream | 155997 | 91780201 ~ 91837180 (-) |
| LOC110499762 | cbpa2 | coding | upstream | 397551 | 92021755 ~ 92027773 (-) |
| LOC110499841 | LOC106561606 | coding | upstream | 529180 | 92153384 ~ 92190372 (-) |
| G203829 | NA | non-coding | downstream | 106188 | 91464310 ~ 91500557 (-) |
| G203780 | NA | non-coding | downstream | 208263 | 91398064 ~ 91398482 (-) |
| G203163 | NA | non-coding | downstream | 367931 | 91238517 ~ 91238814 (-) |
| G203162 | NA | non-coding | downstream | 368308 | 91238230 ~ 91238437 (-) |
| G202932 | NA | non-coding | downstream | 679733 | 90850730 ~ 90927012 (-) |
| G204018 | NA | non-coding | upstream | 135534 | 91759738 ~ 91801240 (-) |
| G203975 | LOC106561596 | non-coding | upstream | 147098 | 91771302 ~ 91773128 (-) |
| G204050 | NA | non-coding | upstream | 227113 | 91851317 ~ 91852018 (-) |
| G204052 | NA | non-coding | upstream | 229091 | 91853295 ~ 91853597 (-) |
| G204096 | NA | non-coding | upstream | 277753 | 91901957 ~ 91905169 (-) |
| G203915 | rassf9 | other | downstream | 15696 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 1165320 | 90377557 ~ 90441425 (-) |
| LOC110499346 | vps4a | other | downstream | 1996855 | 89606837 ~ 89609890 (-) |
| G198912 | NA | other | downstream | 4280276 | 87322139 ~ 87326469 (-) |
| G198342 | LOC100194703 | other | downstream | 4702789 | 86903036 ~ 86903956 (-) |
| G204024 | NA | other | upstream | 162983 | 91787187 ~ 91788103 (-) |
| LOC110499897 | LOC106573100 | other | upstream | 773856 | 92398054 ~ 92443838 (-) |
| G205192 | NA | other | upstream | 1337840 | 92962044 ~ 92962934 (-) |
| G206742 | LOC106561643 | other | upstream | 2688220 | 94312424 ~ 94312774 (-) |
| G206744 | LOC106561643 | other | upstream | 2689186 | 94313390 ~ 94313918 (-) |
