LOC110499762 (cbpa2)


Basic Information

Item Value
gene id LOC110499762
gene name cbpa2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92021755 ~ 92027773 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021576828.2
GGAACAATGCACCTGTTGTTGAGTATAAAGGCAGGTGCTTTGAGAGCTGGCAGTAGTGGACAGGACACAGGAAGGATGAAGGTGCTGGTACTCTTTGCGCTGCTTGCAGCCGCCAATTGTGAGAAGGTCTTCATTGGagaccaggtcatcagggtcaatgtggagtctGAGGAGCAGATTCTGCTTCTGCGTGCTCTGGAGCAGGACACATACTGGGATCTGGACTTTTGGCTCCACCCTGTGAACACTGAGGTCCCTGTGGACATCCGCGTGCCCTCCTCCAGCCTGTACGCTGTCAAGGACTACCTCCGTGCCCATAACATCCAGTTCTCTGTCATGATTAGCAACCTGCAGGAACTCCTGGATGAGGAGAaggcagagatggaggagaaCAATATGAGCGAGCGCAGCTCCAAGAGCTTCAACTTTGGAGCCTATCACTCTCTGGAGACgATCTACAGCTGGATGGATGGCCTGGTGGCTGCTCACCCTAACCTAGTTACCAAGGAACAGATCGGAACCTCCTATGAAGGCAGGCCCATGTATGTCCTGAAGTTCAGCACGGGTGGTGACAAGCGTCCTGCCATCTGGGTTGACTCTGGTATCCACTCCAGAGAGTGGGTGTCTCAGGCCACTGGAGTGTGGACCGCCAACCAGATTGCCAGTGACTATGGTACTGATGCTTCCCTGACCTCCCTCCTGAAAACCATGGACATCTACCTGCTGATTCTAGCCAACCCTGATGGATACGTCCACAGCCACACCAGTGACCGTATGTGGCGCAAGACTCGCTCCAAGAACCCTGGCTCCATGTGCCGTGGTGTCGACCCCAACAGGAACTGGGATGCCGGTTTTGGAGgcCCCGGTGCTAGTACCAACCCCTGCTCTGACTCGTACCATGGCCCATCTCCCCACTCTGAGATAGAGGTGAAGAACGTTGTGAACCTGGTGAAGAACCACGGCAACTTCAAGTCCTTCATCTCCATCCACGCCTACTCCCAGCTGCTCATGTACCCCTACGGATACACCTGCACAGATGCGCTCCACGCGGCTGAACTGGACTCTGTGGGCAGGTCTGCAGTCCAGAAGCTCAGCTCTCTCCATGGAACCACATATAAGGTTGGCAGCATCTGCAAGATCATCTATCAGGCCAGCGGAGGCAGCATCGATTGGACCTATAACCTGGGCATCAAGTACTCCTTTGCCTTCGAGCTGAGGGACACCGGTCGCTATGGTTTCATCCTGCCAGCCAATCAgatcatccccactgcctctgagaCCTGGCTGGCCCTGAAGGACATCATGGAGTATGTCCGTGACCACTCCTATTAAGTCTCAAACCTACCCAACACACAACCTTTCCTTCCAAGGCCTGAACTCAGTTAAATAAAGAATTCTAGGTCGGGAAAAA

Function

NR:

description
carboxypeptidase A2-like

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004181 metallocarboxypeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01298 CPA2; carboxypeptidase A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021576828.2 True 1411 mRNA 0.54 11 92021755 92027773

Neighbor

gene id symbol gene type direction distance location
lrrk2 lrrk2 coding downstream 184575 91780201 ~ 91837180 (-)
lrriq1 lrriq1 coding downstream 280926 91691853 ~ 91740829 (-)
alx1 LOC106561592 coding downstream 348025 91668397 ~ 91673730 (-)
LOC110499699 NA coding downstream 397551 91606745 ~ 91624204 (-)
nts LOC106561634 coding downstream 440449 91560700 ~ 91581306 (-)
LOC110499841 LOC106561606 coding upstream 125611 92153384 ~ 92190372 (-)
LOC110533906 NA coding upstream 169563 92197336 ~ 92202031 (-)
LOC110502383 LOC106561607 coding upstream 182557 92210330 ~ 92228748 (-)
cry2 LOC106561609 coding upstream 205658 92233431 ~ 92265019 (-)
LOC110499897 LOC106573100 coding upstream 370281 92398054 ~ 92443838 (-)
G204088 NA non-coding downstream 86581 91933145 ~ 91935174 (-)
G204096 NA non-coding downstream 116586 91901957 ~ 91905169 (-)
G204052 NA non-coding downstream 168158 91853295 ~ 91853597 (-)
G204050 NA non-coding downstream 169737 91851317 ~ 91852018 (-)
G204018 NA non-coding downstream 220515 91759738 ~ 91801240 (-)
G204165 NA non-coding upstream 24120 92051893 ~ 92052201 (-)
G204166 NA non-coding upstream 25506 92053279 ~ 92053486 (-)
G204171 NA non-coding upstream 31843 92059616 ~ 92059971 (-)
G204187 NA non-coding upstream 58542 92086315 ~ 92086523 (-)
G204196 NA non-coding upstream 71617 92099390 ~ 92099781 (-)
G204024 NA other downstream 233652 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 430706 91589212 ~ 91591049 (-)
G202279 NA other downstream 1580330 90377557 ~ 90441425 (-)
LOC110499346 vps4a other downstream 2411865 89606837 ~ 89609890 (-)
G198912 NA other downstream 4695286 87322139 ~ 87326469 (-)
G205192 NA other upstream 934271 92962044 ~ 92962934 (-)
G206742 LOC106561643 other upstream 2284651 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 2285617 94313390 ~ 94313918 (-)
G206750 NA other upstream 2300137 94327910 ~ 94328183 (-)

Expression


Co-expression Network