LOC110499887


Basic Information

Item Value
gene id LOC110499887
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 92427643 ~ 92428734 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110499887
ctGAAATGATGTGTTTTTTTCTCTTTGTCTGGTTTTTCTGTTGTTTCTTCTGCTTTTCCTTTATCTTTTCTATATGGCAATCAATTTCAAGGATCCTCAATCAACTTAGACAAACTGAGGGTGATATATAATCGTATAGTACATAACAAACTCTCTTGGGTTATCATGGCCTTGAGGTGAGCCTTGCAGTTCGTTTTCAAAGTGGGTGACCGAAGCTAAACAGGCACCTTTTACCGAGATGTGCTCGGCATGAAGATTTCAAAGAGTTTGAAGAGGGATGCAACTTGTAAGGGCCCTTATGATGGAAAATGGAGCAAGACAATGGTCAACTGGGCCAGAGGATGGTCGCTTTGTGGCTCAACTGACCTACAATTATGTAGTGGGACTTCCTGGGTCTGACTCTACACTCTAGCCAGGCTGTCAGCAATGCTAAGCAGCTTGGTTGGCCCTTAGTTGGCCCTTAGGTTGGAAAGGTCGTCTATCTGGATGAGGGCCCAGGAGGTTATCACTTCTACCTGGTGGACAAAGAACAGCCTCCCACTGATCCCGTACAGAAGGTGAGTCCGGCAGGGTCTGCCCTGCAGAAATCAATACACTGCTGCTCCTCCCTTCTGGGAACgaaggtgaaagagagaaatGAGGCGAAGAAGACTGCTGATGGGATTCACAGACACTCAGTGTAAACTAGAGCTTCACAACATTGTTGGGACAGTAGACCATGGGACAGCCTTTGGACGTAAAGCATTCTCTTGTCCATGTGAGCAGTTGGCAGATCTTGAAGCACTGATGAAAGGAAACAAAAGGAAACCATAAAATCCTTACTATCTTGGTTAGCCTGGACACCCCATGAGATCTGCGTTGTTGTTTGAGCCTTTATTGTGCTGTGGGTTTCCCAGACCCAATAAAGGTTATTTAAAACTCaaactctttctctgtctctttctctgtctctgtctctctttctctctctctgccttaccCCTCTTTTACACACGCACTCTACTACCATCCAAATGTGGCCATACATTCCATAAACAGACCCTGTCTGGCTGCCGTGGCTCAGGTGATGGATGGATGTCTCTGTTAGATCCT

Function

NR:

description
glyoxalase domain-containing protein 4-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110499887 True 1092 mRNA 0.46 1 92427643 92428734

Neighbor

gene id symbol gene type direction distance location
cry2 LOC106561609 coding downstream 162624 92233431 ~ 92265019 (-)
LOC110502383 LOC106561607 coding downstream 198895 92210330 ~ 92228748 (-)
LOC110533906 NA coding downstream 225612 92197336 ~ 92202031 (-)
LOC110499841 LOC106561606 coding downstream 237271 92153384 ~ 92190372 (-)
LOC110499762 cbpa2 coding downstream 399870 92021755 ~ 92027773 (-)
LOC110499952 LOC106561617 coding upstream 441112 92869846 ~ 92881298 (-)
LOC110499968 NA coding upstream 658527 93087261 ~ 93090465 (-)
LOC118936876 NA coding upstream 747576 93176310 ~ 93199900 (-)
LOC110499982 LOC106561633 coding upstream 909163 93337897 ~ 93372952 (-)
LOC110499989 LOC106573087 coding upstream 1048327 93477061 ~ 93606905 (-)
G204547 NA non-coding downstream 30102 92396070 ~ 92397541 (-)
G204421 NA non-coding downstream 100820 92326597 ~ 92326823 (-)
G204379 NA non-coding downstream 119900 92255744 ~ 92307743 (-)
G204290 NA non-coding downstream 218077 92209305 ~ 92209566 (-)
G204288 NA non-coding downstream 220303 92207090 ~ 92207340 (-)
G204728 NA non-coding upstream 35367 92464101 ~ 92464313 (-)
G204736 NA non-coding upstream 40791 92469525 ~ 92469862 (-)
G204738 NA non-coding upstream 46929 92475663 ~ 92480209 (-)
G204792 NA non-coding upstream 177284 92606018 ~ 92606777 (-)
G204793 NA non-coding upstream 178909 92607643 ~ 92607903 (-)
G204024 NA other downstream 639540 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 836594 91589212 ~ 91591049 (-)
G202279 NA other downstream 1986218 90377557 ~ 90441425 (-)
LOC110499346 vps4a other downstream 2817753 89606837 ~ 89609890 (-)
G198912 NA other downstream 5101174 87322139 ~ 87326469 (-)
G205192 NA other upstream 533310 92962044 ~ 92962934 (-)
G206742 LOC106561643 other upstream 1883690 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 1884656 94313390 ~ 94313918 (-)
G206750 NA other upstream 1899176 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 2188181 94616915 ~ 94617232 (-)

Expression


Co-expression Network