trnap-agg-6


Basic Information

Item Value
gene id trnap-agg-6
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93067314 ~ 93067385 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-6
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-6 True 72 mRNA 0.58 1 93067314 93067385

Neighbor

gene id symbol gene type direction distance location
trnap-ugg-6 NA coding upstream 3005 93064238 ~ 93064309 (+)
trnap-agg-5 NA coding upstream 5557 93061686 ~ 93061757 (+)
trnap-agg-4 NA coding upstream 13709 93053534 ~ 93053605 (+)
trnap-ugg-5 NA coding upstream 16927 93050316 ~ 93050387 (+)
trnap-ugg-4 NA coding upstream 26526 93040717 ~ 93040788 (+)
ric8a ric8a coding downstream 1451 93068836 ~ 93084885 (+)
LOC110499974 LOC106561627 coding downstream 203570 93270955 ~ 93335518 (+)
LOC110502396 LOC105018284 coding downstream 305922 93373307 ~ 93376905 (+)
LOC118936880 NA coding downstream 555648 93623033 ~ 93624085 (+)
LOC118936881 NA coding downstream 648704 93716089 ~ 93721762 (+)
G205269 NA non-coding upstream 310 93048124 ~ 93067004 (+)
G205255 NA non-coding upstream 38206 93028907 ~ 93029108 (+)
G205250 NA non-coding upstream 49210 93017718 ~ 93018104 (+)
G205248 NA non-coding upstream 57488 93009597 ~ 93009826 (+)
G205208 NA non-coding upstream 91470 92975542 ~ 92975844 (+)
G205291 NA non-coding downstream 19878 93087263 ~ 93090300 (+)
G205349 NA non-coding downstream 111139 93178524 ~ 93195314 (+)
G205433 NA non-coding downstream 236272 93303657 ~ 93305171 (+)
G205405 NA non-coding downstream 269769 93337154 ~ 93337714 (+)
G205404 NA non-coding downstream 310350 93371393 ~ 93388550 (+)
LOC110499942 LOC106561637 other upstream 229187 92837196 ~ 92839440 (+)
G204593 NA other upstream 384959 92681346 ~ 92682355 (+)
G204240 ckap5 other upstream 907411 92157275 ~ 92159903 (+)
G203646 cpa2 other upstream 1042572 92021755 ~ 92024742 (+)
G203551 NA other upstream 1219914 91826849 ~ 91847400 (+)
G205482 NA other downstream 334232 93401617 ~ 93402234 (+)
G205683 LOC106573085 other downstream 728697 93796082 ~ 93798936 (+)
G205688 NA other downstream 742975 93810360 ~ 93812169 (+)
G206285 NA other downstream 873101 93940486 ~ 93941471 (+)

Expression


Co-expression Network