Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110499968 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 93087261 ~ 93090465 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| cytochrome c oxidase subunit 8B, mitochondrial-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005038829.1 | False | 699 | mRNA | 0.47 | 2 | 93087261 | 93090465 |
| TU232906 | True | 462 | lncRNA | 0.48 | 2 | 93087261 | 93090228 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499952 | LOC106561617 | coding | downstream | 205963 | 92869846 ~ 92881298 (-) |
| LOC110499897 | LOC106573100 | coding | downstream | 647629 | 92398054 ~ 92443838 (-) |
| LOC110499887 | NA | coding | downstream | 658527 | 92427643 ~ 92428734 (-) |
| cry2 | LOC106561609 | coding | downstream | 822242 | 92233431 ~ 92265019 (-) |
| LOC110502383 | LOC106561607 | coding | downstream | 858513 | 92210330 ~ 92228748 (-) |
| LOC118936876 | NA | coding | upstream | 85845 | 93176310 ~ 93199900 (-) |
| LOC110499982 | LOC106561633 | coding | upstream | 247432 | 93337897 ~ 93372952 (-) |
| LOC110499989 | LOC106573087 | coding | upstream | 386596 | 93477061 ~ 93606905 (-) |
| LOC110502409 | LOC106561641 | coding | upstream | 669178 | 93759643 ~ 93925168 (-) |
| LOC110499999 | LOC106561640 | coding | upstream | 843950 | 93934415 ~ 94085913 (-) |
| G205226 | NA | non-coding | downstream | 94830 | 92992139 ~ 92992431 (-) |
| G205224 | NA | non-coding | downstream | 98068 | 92988986 ~ 92989193 (-) |
| G205204 | NA | non-coding | downstream | 115705 | 92971315 ~ 92971556 (-) |
| G205203 | NA | non-coding | downstream | 116560 | 92970491 ~ 92970701 (-) |
| G205199 | NA | non-coding | downstream | 119905 | 92967142 ~ 92967356 (-) |
| G205792 | NA | non-coding | upstream | 1233 | 93091698 ~ 93092277 (-) |
| G205831 | NA | non-coding | upstream | 60480 | 93150945 ~ 93192846 (-) |
| G205839 | NA | non-coding | upstream | 79410 | 93169875 ~ 93264583 (-) |
| G205872 | NA | non-coding | upstream | 131103 | 93221568 ~ 93225066 (-) |
| G205873 | NA | non-coding | upstream | 131269 | 93221734 ~ 93224939 (-) |
| G205192 | NA | other | downstream | 124327 | 92962044 ~ 92962934 (-) |
| G204024 | NA | other | downstream | 1299158 | 91787187 ~ 91788103 (-) |
| G203915 | rassf9 | other | downstream | 1496212 | 91589212 ~ 91591049 (-) |
| G202279 | NA | other | downstream | 2645836 | 90377557 ~ 90441425 (-) |
| G206742 | LOC106561643 | other | upstream | 1221959 | 94312424 ~ 94312774 (-) |
| G206744 | LOC106561643 | other | upstream | 1222925 | 94313390 ~ 94313918 (-) |
| G206750 | NA | other | upstream | 1237445 | 94327910 ~ 94328183 (-) |
| G207244 | LOC100194703 | other | upstream | 1526450 | 94616915 ~ 94617232 (-) |
| G207249 | NA | other | upstream | 1538972 | 94629437 ~ 94629739 (-) |
