XLOC_020731


Basic Information

Item Value
gene id XLOC_020731
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2702802 ~ 2791490 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042290
CGATTGTAGAAAGCAAACGCTGAATATTGAACATCTCAGGAAATGTAGAAATCAATGCAGGTGCATTCAGTCCTCAAaaacagacatgtgcaggaaaaTATGGACATATGCTAAACTATTAAATCTGATGTTTGTGAAAACACAATGGAGTTTTCTGGGAGGTAAATGACGTTGATGTGTAAACATCTTTACTAACATGACTAAGACCTCTCCACTGCATGAACTCTAAGATGGCTCTTCACCTCTGAAGACCTCAGGAATGTTTTGCCGCAGTGATCAcacttgtgttttttctctccattgtggATCAGCATGTGTGATTTAAGGTTTGATAATTGGGTAAAACTCTTCCAACATTCAGTgcatgtgtacggtttctctccggtgtgaatccgcTCATGTGCTTTCCGGCATTCCAACCTGGCAaagctcttgtcgcagtgtgagcACTTGTGCGGTTTCTCTCCACTGTGAACCACCTGGTGTCTTTTCAAGTGTCCAACACTGATAAAAGTCTTCTTACACTCAAAGCACGCaaactctttcacaccagtgtggatctgctcatgtttttttaaacatttcttaaatgtaaaactctttccacataaCAAACATGAATAAGGCCTGTCGTTTGAATGAATTCTAAGATGAGCCTTCAGGTCTGCACGCCTCAAGAATGCTTTGCCGCATTGATCACACGTGTGtgttctctctccagtgtggatcaccACGTGTTCATTAAGTTTTGATGAATATCTGAAGCTCTTCCCGCACTGAGTACATGAGTACGGTTTCTCTCGAGTGTGAGTCCGCTCATGTACTTTCAGGATTTGTAAAAGAccgaatctcttgtcgcagtgtgaacacttgtacggtttctctccactgTGAGTCCTCTGGTGTCGGTTTAAGTCTCCAActctaataaaagtcttctcgCACTCAACGCAGGCATGCTTTTTCACACCTATGTGGACCATCTGGTGCGAGTTCAAGTCTCCAGCTCTAATACAACTCTTTCCGCACTCAGAGCAGGAATACGGCTTCTCGTTTGTGTGCCGTCTAAGATGGATCTTCAGCTCTGAACGCCTTGAAAATATTTTGCCGCATCGATCACAAGTGTAcggtttctcttcagtgtgagTCATCTGATGCTGTTTTAAGTTTGACTCAAATttaaaactcctcccacactgagtgcatgcgtaCGGTTTCTCTTCGGTGTGAATCATCTGATGTTGTCTTAACTTTGACTGAaatttaaaactctttccacacaaaGAGCATGGATAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042290 True 1296 lncRNA 0.43 2 2702802 2791490

Neighbor

gene id symbol gene type direction distance location
XLOC_020728 NA coding downstream 56792 2569177 ~ 2646010 (-)
XLOC_020729 NA coding downstream 78928 2599019 ~ 2623874 (-)
XLOC_020730 NA coding downstream 90993 2602217 ~ 2611809 (-)
XLOC_020727 NA coding downstream 157251 2529254 ~ 2545551 (-)
XLOC_020725 NA coding downstream 163160 2520932 ~ 2539642 (-)
XLOC_020734 NA coding upstream 3538 2795028 ~ 2825701 (-)
XLOC_020735 NA coding upstream 7975 2799465 ~ 2807027 (-)
XLOC_020736 NA coding upstream 22973 2814463 ~ 2828086 (-)
XLOC_020737 aqp12 coding upstream 83348 2874838 ~ 2886937 (-)
XLOC_020738 NA coding upstream 98173 2889663 ~ 2892546 (-)
XLOC_020747 NA non-coding upstream 556023 3347513 ~ 3347884 (-)

Expression


Co-expression Network