LOC118943611


Basic Information

Item Value
gene id LOC118943611
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 93937585 ~ 93940374 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005038844.1
tacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtacatgcttAGTAAATGAATGTTTGCATACATAAGCATACAGTGAGGGCACTCATCCCAGTCCATATTAGCTCTAACTATCTGCAGTAATCTAGATATGCTTGCACTAGCATCCTCTAATCATTTTTCTAGACTGCTTGCTTTTCCAACCACGCATGCAAATATGAAGAACGGTGAAGCACTTTATTTATGTATAGCGTTTTGGAAACCTTATTTTGTACTGGTCCAGCTTTATCCCCAATTTATCTGATGGGTTTTGCTTTTGTATTTGCTATTATTACTTTTTGTATCATATATTTAAACATAAATATGTTATATAATATACATGATATGCTGTGATACATACATCTATAGATTATGGATATATAATGTTGTCTGATGTGCGTAATGTGGTGAAGATCTTATAAGAAAATTACTGTAGGCAATAATGTATTGGATGAAATCctagatatgtacagtatatgttatCCAGTATGAAGCTACTGTTGGAGGGACATGGCCAGCACTGAGAGTACTGTCAATCCCAGGGCTAAAAGGATGCTATTTAAAGTTTATACAAGGCTAAATGCTATTGTCCACATCATAACTCTATCTAGTTTGTGATCCTAACATGAGAGAAACTCTAATCTGTCCATTCAAATAAGAAAATAATAGACAATATAACACAGTTTAAATCGTTAAAAAAACAAGTATTAGATAATATATCACAAGGCTAAATGTATGATATTAGAGTGCCTTTGTGAAGAGATATCAATCTTTCCATCGATGCCATTATTCCAACCAAGGTGGACTAGAGCTTTATGTCAATAGAGACATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACCACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACCACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGAAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACCACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGAAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACCACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACCACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACCACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGAAGTAAGTCCTGTACTATAACAACCTAACTCTACTGACCTGTTCTGGTGTGACTGCAGTAAGTCCTGTACTATAACAACCTAACTCTACCGACCTGTTCTGGTGTGACTGCAGAGTACTGCTAGGTGTCAGGCAAGGTAAGGAAGGGTACTGCTAGGTGTTAACCAAGGTAAGGAAGGGTACTGCTAGGTGTCAGCCAAGGTAAGGAAGGGTACTGCTAGGTGTCAGGCAAGGTAAGGAAGGGTACTGCTAGGTGTCAGGCAAGGTAAGGAAGGGTACTGCTAGACTGGTGTGAGAGGAGGAACCAAAGAGCTGCTATACTGTGATGTCTGTTAGATAAACAGTAACTAAAGGCTTGTTGTAAAATCCATCCCAGGATTACACCACTGTCCTTATGTGTCTTCTAAACGGTTATGAGATGTCATAAAGCCTACATAGTGATGTCATAACATATCATAGGATAATGTTTTTGTGCCATATGCAGTGATTTTGATCAGTTAACTGTAGATTGTAGCCTGATCCCGGTAGTCATTTTTATGCATTGTGATATAAGCTGACATAACCTGTTATGAATGGTAATAACACGTAGTAAATTATGAATAATCATTATTGAAGCTTTATGAAGGAGTGTTCACCTGCTATTCACTGTCAGGAATCATAACCTCACATCGATTTCAATGTTGTCTAactaatgttttaaaaaaaaaaaaaaaaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005038844.1 True 2758 mRNA 0.40 2 93937585 93940374

Neighbor

gene id symbol gene type direction distance location
LOC110502409 LOC106561641 coding downstream 12417 93759643 ~ 93925168 (-)
LOC110499989 LOC106573087 coding downstream 330680 93477061 ~ 93606905 (-)
LOC110499982 LOC106561633 coding downstream 564633 93337897 ~ 93372952 (-)
LOC118936876 NA coding downstream 737685 93176310 ~ 93199900 (-)
LOC110499968 NA coding downstream 847120 93087261 ~ 93090465 (-)
LOC110500006 LOC106561642 coding upstream 160574 94100948 ~ 94141288 (-)
LOC110500013 LOC106561647 coding upstream 231507 94171881 ~ 94180442 (-)
LOC110500043 LOC106561646 coding upstream 243825 94184199 ~ 94221146 (-)
LOC110500065 LOC106561650 coding upstream 281992 94222366 ~ 94229545 (-)
LOC110500060 tnni3 coding upstream 292360 94232734 ~ 94243566 (-)
G206563 NA non-coding downstream 4807 93932287 ~ 93932778 (-)
G206249 NA non-coding downstream 56091 93879956 ~ 93881494 (-)
G206247 NA non-coding downstream 58449 93878155 ~ 93879136 (-)
G206235 NA non-coding downstream 85849 93850896 ~ 93851736 (-)
G206215 NA non-coding downstream 117000 93820151 ~ 93820585 (-)
G206565 NA non-coding upstream 103 93940477 ~ 93941489 (-)
G206619 NA non-coding upstream 98686 94039060 ~ 94039523 (-)
G206645 NA non-coding upstream 147966 94088340 ~ 94088677 (-)
G206605 NA non-coding upstream 157862 94098236 ~ 94100426 (-)
G206669 NA non-coding upstream 192475 94132849 ~ 94134411 (-)
G205192 NA other downstream 974651 92962044 ~ 92962934 (-)
LOC110499897 LOC106573100 other downstream 1497984 92398054 ~ 92443838 (-)
G204024 NA other downstream 2149482 91787187 ~ 91788103 (-)
G203915 rassf9 other downstream 2346536 91589212 ~ 91591049 (-)
G202279 NA other downstream 3496160 90377557 ~ 90441425 (-)
G206742 LOC106561643 other upstream 372050 94312424 ~ 94312774 (-)
G206744 LOC106561643 other upstream 373016 94313390 ~ 94313918 (-)
G206750 NA other upstream 387536 94327910 ~ 94328183 (-)
G207244 LOC100194703 other upstream 676541 94616915 ~ 94617232 (-)
G207249 NA other upstream 689063 94629437 ~ 94629739 (-)

Expression


Co-expression Network