LOC110500081


Basic Information

Item Value
gene id LOC110500081
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94264009 ~ 94268751 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036959574.1
TTACCTCAAAGCATTTCCTTGTTCAAGCCTGCACATGTCCTCCTGCAAGCTACCTGTATTTCATTCTCAGAATTGAAGGCTTCACATTGTACCATCacaacacatctccaacacatgTTATCCTTATTGTGTACATAGGCCTGCGTTTTCAGGGACGTGCAGAACATTTCTCGAGGACAATGGACCTGTACTGTGTTTGGTTGATCATCTTTGGACTGACTCTGACGTCAACTCTCAGGATTCTGGAATGGCCACCCCTGAACTGCACACAACTGGATCTTCAATGCAGCGTTCAAATTAATAACTGTTCAGACGAGGGCTGGATTATACCCAGACACCAGGCGCCTAACGGTCCCCTGTGGCACTCAGGTTCACAGCAGCATGTGTttgtgaggagaggggagagtggtgATCTGCTACCCGTGATGTCTCTGAGCTGGAGCCTTCAGATCAATGGAGGTGTAATCAATGGGACCAGTGGGACCGAGGTGCACGTCACTGAAGAGGACAGTAATAAAAGCATATGTGTCCGATACATCTTCcataacaaaatacaaaacatgaTGATTAACTGGAAGCCGTGGACATTTTCCTTGGACAGAGTTGTGGTGGACCCCGAAAACAAGTATTCTGTTTCCATCTACAACTTACCAAAACCAGACCTGGGGAATTACAGACTTGACAAAATCTTTACAATCCCAGGATGCATGGATCCAAGAATAAAAGCAGCCAAGGTGTGTTTGGAAAACGGCAGTCTTTGGGATCCCCAGTTGTCCTGGACTGTGTcagtggatggaggagagagactgatcaTCACAGTGGGTTTTAATACAGCTGAGTTCTCTGACGAATACCAGATATCCATCCAGAACACTCAACACTCACAGCATGTCATGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCATGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCATGAGGGTAGGTATCTGTGGTCAAAAACACTCACAGCATGTCTTGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCTTGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCATGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATATCACGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCACGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCACGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCACGAGGGTAGGTATCTGTGGTCAACAACACTCACAGCATGTCACGAGGGTAGGTATCTGTGGTCAACAACACTCACAACATGTCACGAGGGTAGGTATCTGTGGTCAACAACACTCACAACATGTCACGAGGGTAGGTATCTGTGGTCAACAACACTCAATGATGAAACATTGGTCATTGATTACTGTGTTCCTGGAACTTATTACTGTGTCATGATTTCTTCAATTCCCTTCAATTCCTGTTTCAGGAGAATAGAACATCATTGAATGTGACTTTTGAACTGGATGTATGGCAGCTGCCTCCATGTGAAATGCTAATTGTGaTTCAGCCATTTTTTATACGGTGCAAGAGCAACTGTTTACATCACCAGACAAAGTGTAACTACTGCTCCT

Function

NR:

description
interleukin-17 receptor A-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036959574.1 True 1663 mRNA 0.46 8 94264009 94268751

Neighbor

gene id symbol gene type direction distance location
dnm1l LOC106561645 coding upstream 91213 94150431 ~ 94172796 (+)
LOC110500011 LOC106561648 coding upstream 114542 94145663 ~ 94149467 (+)
LOC118936881 NA coding upstream 542247 93716089 ~ 93721762 (+)
LOC118936880 NA coding upstream 639924 93623033 ~ 93624085 (+)
LOC110502396 LOC105018284 coding upstream 887104 93373307 ~ 93376905 (+)
zgc:136858 LOC106561644 coding downstream 1809 94270560 ~ 94300044 (+)
LOC110500101 LOC106561643 coding downstream 31418 94300169 ~ 94317655 (+)
LOC110500139 LOC106561672 coding downstream 122613 94391364 ~ 94437682 (+)
LOC110500169 lap2b coding downstream 230201 94498952 ~ 94504181 (+)
LOC110500174 LOC106561671 coding downstream 236631 94505382 ~ 94513747 (+)
G206447 NA non-coding upstream 32048 94231104 ~ 94231961 (+)
G206426 LOC106561647 non-coding upstream 86636 94174060 ~ 94177373 (+)
G206421 NA non-coding upstream 105811 94157424 ~ 94158198 (+)
G206419 NA non-coding upstream 119077 94144459 ~ 94144932 (+)
G206418 NA non-coding upstream 120188 94143584 ~ 94143821 (+)
G206474 NA non-coding downstream 4372 94273123 ~ 94273412 (+)
G206475 NA non-coding downstream 8783 94277534 ~ 94277752 (+)
G206471 NA non-coding downstream 41996 94310747 ~ 94311155 (+)
G206479 NA non-coding downstream 45882 94314633 ~ 94314872 (+)
G206480 NA non-coding downstream 50421 94319172 ~ 94319399 (+)
G206389 LOC106561642 other upstream 162137 94100979 ~ 94101872 (+)
G206285 NA other upstream 322538 93940486 ~ 93941471 (+)
G205688 NA other upstream 451840 93810360 ~ 93812169 (+)
G205683 LOC106573085 other upstream 465073 93796082 ~ 93798936 (+)
G205482 NA other upstream 861775 93401617 ~ 93402234 (+)
G206850 NA other downstream 288418 94557169 ~ 94562224 (+)
G206908 NA other downstream 363078 94631829 ~ 94632267 (+)
G206926 NA other downstream 437195 94705946 ~ 94706248 (+)
G208404 NA other downstream 1959042 96227793 ~ 96228463 (+)

Expression


Co-expression Network