LOC110500169 (lap2b)


Basic Information

Item Value
gene id LOC110500169
gene name lap2b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94498952 ~ 94504181 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021577366.2
CTCTTTGTTGCCTTAGCTTGGTATTAACTGGTTTACGACTGCGGACAGACAGACTCAAATAGGCCGGGCTTTAACTAATAGGGCATACAGTTCTTTAAATAGTTTTAAATCCGTATTTACTTgttgagtttaaatatataatTAAATTGCATCTGTATTTTTGCTAAATAATCGAATATATCTGAAGATTTAAAAAAGTAACTAAACCGGATAGCTTGTTCATGCTAGCTAAATTAAATCGCTGGGCTCCAGTCTTTTCATTTGCCGACATTGCTAGCTCTGCACGtttccttgttgttgttgttgttgttagcgACCGAGTTTGGCTAACTGCTACATTTCAGCATTACTTGCTAGCTACAGTTTTTAGCTAGAAGAAAGCAATCAGGCATGGCGGAATTCCTCGAAGATCCGTCTGTTCTCACTAAGGATAAGCTCAAAAGTGAGCTCACGGCCAACCATGTCCCACTTCCCAGCTCCGAACAGAAGAAAGACGTCTACGTTCAGTTGTACCTGAAAAATTTGACCGTTCAGAACAAGAAATGTCCACCATCTGTAGACACGTTCTCCAGTGATGAAGAATTGCCTGCCCCTGTAGTCTCCAACAAGAGCCGATCTGGAAGAAAAGCTACCCGAAAGACAGACAAGCCTCGCTCAGAAGAAGTGGAAGTCACAGACCTCACCGATGCAAGTTTAAAAGATGAGCTGTTGAAGCATGGAGTCAACACTGGGCCCATAGTTGGCTCCACCAGGAAGCTTTATGAGAAAAAGCTTCAGAAGCTACTGGATACACCTGCAGCTGAGACTACGCCCAGCCCACCTGAAACTGCCACAGTTAACGCTGCAGCCAAGGCAGATGGCAACCAGAACGGCAACACATACTCTGGCCAGTACAGTGACAAGGAGGAAGATGAGATAGGTACCGCTACGGAACCAGAGCCTGTTCCTGTTGTGGAGAAGCCTGTGAGGAGCAGAGAGAAGACTCCTGTCACTGTTAGGAACAGCAGCAGACGGAGCAGCAAGCTACAGGTGGTGGAGGTGAGCCTAGCAACGGGCGACCAGACCCCTAAGAAGACGAGGGAGAATGTTGAAGAGATTCTCGCTAATGAGATCTTTTCACCCACAGGCATCAGcgCCAGCTGCAGGCGACCGATTCGCGGCGCGGCGGGCCGACCGGTGAAACCCAGCAACTACTGGCTGAACGAGTCTCTCCTGGAGCACTCCATCTATACAGAGTCTTATTCTGGATGCAGCTCCTTGGGCTCCAACGTGCCGGCCAGGCCCGGCTTCCTCTCTGTACTATTAAAGCTCATGGTACTCGTCACTGTAGCTGGGTCCATCTACTTCGCCATTCAGCACCTCGATGCAGATCAGGTTCAGTCCTTCAAGGGAATGCTGACCGACGCCAAGGGTCTCCTAAACAGCGCTAAGGGTCACCTGTGTAGCGCGGTTGATAAGGTGGTGGATGCCGTGTTCGATAATGTGATTGTGCCGCTGGGTATCGGGGGAGGCAGCAGCCAAGGTGCAGAAGCAGAGAGTGGCGGCCGGTAAGCAGTGCACCCTCTCCACCCtgctttctttttttgttgtattattttaccgttattttaccaggttgtCCAATTGAGGTCAGATCCCCGGTTATTCAACAGACCACCTGGCCACTGCTCTGCCATCCACACCTCACTAGCTCACCACACCCCCCTCCATCGTCATCCTCTGGTCACTACCTTGGAGGACGGACTGACTTTTAATCTGGGCTGGTAGACTATCATCCTGTCCCCTCCTTGTTCACTTTTCCTCACCCCACGTGAGGAGGGCAGGAGGGGTATTCAACCCAACCAACACCAGCTTCCTGGAAAACCAACACTGTCTTGCCAAGACAGTCTAAAGAGACTTGTTTTTATTATGACGTTGTTTTTAATCGTAGTGTGAAGTCTTATGTTGTGTATcctttgtgtgtgtatttttagaAAGGACAGACAAATCGTACGCATGGTTGTAGTTTTTTGAAGGACATGTTTGTCGTTTTTGGAGTGTCTGTGGTGCCAGGTGTTTTTCTGATGGTGAAGTGCATGCACAGTGATAGCACTTAGTGCCAGTGTAggtgtcaattccatttcaattccagtcaattcagaaagtaaacaatTCCAAATGTTCCTCATTAAAAAGCATGGAAGAGAATTGGAATtccagtgtacttcctgaatcgACTGGAATTGACATGGAATTTACCTCAACCCTGCTTAGTGCCCTCCCACTAATTCAAGCACAGAGAAATGATATTAATTACAGAAACATTTACAAGTATTTCTGTATTGGTTTTTGAATATACACTAGTAGTAACAATAAAGCTAGGTAGAATAATGGTGCTCAGGTCTATTCTAATTTGCTCTAAATTAATCTGATCAGTGCTGGGAGGAGTGACAGTGTCCAATAGTGTAACTTCAGGTCTCGTCACTGTATGAGGAAAAACCCTTATTTTCAAGCTATAAAGGTTATAAAACTGATTTTCTTTGGTTAAATTGCTCGTTTTTTGGTATATGCTGCAGTAACTAAGTAAGTGGTCTGACCTGTGAATGGCTCATGATGGCACCTGACTTGAGGAGCAGTGACCCAAATCCCAGTATTAGCTTTGTGAGTTTGTGTGAGTTTACGTACATGTTTCATTTAGTAGTGATTTGTTGTGCTAAAGATTCCAGATCTTCCAGTCCCATCTAccgggtcatgttcagtagggcactGTAGCAAAATGGGTATAATCCTCTCTGTTTTAATGTGTGTTTTCCCTGTTTGTTGCCTAAGGAACATGACCCAAGACTGGCTGTCTTTTTTAGTGCACCCACACTGCCCTTCTAAGCGGTTCTGCACACTACTGATCTGGGAAAAATAACGTTTTTGCAATAGGTAGTTGAGCAAATATACGAGTTAACAATGTATTCCATTTTGTTACTTGGATTATAAATTGATATTTACTCTGCCTCATGTACACTTCATTGTCATAGAAGAGGTAACACTAACAATTGCCTGAGGAGAGACAAATGGTAAGCAACTTAACAAATTGATAGCAACTTAACTTATGTTGACCATTCATAGAATTTTGATGTCAAGATGTTGACATTTTTTGTCCAgtgttgaaaataagtattttatttttttttctgtatttttctaATGTGAATTGTTAATGTTGTTCTTTTGTCTAGGTGAAAgtgaaattttaaaaaacaaacaaaaaatgctATCCTAAAACTGAACCTCTTTGTTGACTTGTGGTTACACAGTGAATACAGTAtattaaagctgaaatgtttGTTACTTTGATCAGGCAGCTAGCTTCCCAACGATGGATTGTGGGGGTAAGGATTTTGAATCTGTTTTTATTTAAAATACTATCATGAAATAAATGTGGTAATTGAATTGTC

Function

NR:

description
lamina-associated polypeptide 2-like

GO:

id name namespace
GO:0003677 DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021577366.2 True 3428 mRNA 0.43 6 94498952 94504181

Neighbor

gene id symbol gene type direction distance location
LOC110500139 LOC106561672 coding upstream 94432 94391364 ~ 94437682 (+)
LOC110500101 LOC106561643 coding upstream 181297 94300169 ~ 94317655 (+)
zgc:136858 LOC106561644 coding upstream 198908 94270560 ~ 94300044 (+)
LOC110500081 NA coding upstream 230201 94264009 ~ 94268751 (+)
dnm1l LOC106561645 coding upstream 326156 94150431 ~ 94172796 (+)
LOC110500174 LOC106561671 coding downstream 1201 94505382 ~ 94513747 (+)
LOC118944177 NA coding downstream 6192 94510373 ~ 94510614 (+)
LOC118944176 NA coding downstream 8425 94512606 ~ 94512848 (+)
LOC110500186 LOC106561670 coding downstream 10380 94514561 ~ 94520141 (+)
LOC110500215 LOC106561668 coding downstream 25460 94529641 ~ 94541962 (+)
G206556 NA non-coding upstream 8798 94488578 ~ 94490154 (+)
G206555 NA non-coding upstream 10620 94488131 ~ 94488332 (+)
G206554 NA non-coding upstream 16641 94482072 ~ 94482311 (+)
G206553 NA non-coding upstream 16983 94481759 ~ 94481969 (+)
G206552 NA non-coding upstream 30825 94460839 ~ 94468127 (+)
G206844 NA non-coding downstream 256 94504437 ~ 94504639 (+)
G206858 NA non-coding downstream 22391 94526572 ~ 94527078 (+)
G206859 NA non-coding downstream 23255 94527436 ~ 94528029 (+)
LOC110500196 LOC106561667 non-coding downstream 35476 94539657 ~ 94556385 (+)
G206851 LOC105030512 non-coding downstream 58792 94562973 ~ 94563894 (+)
G206389 LOC106561642 other upstream 397080 94100979 ~ 94101872 (+)
G206285 NA other upstream 557481 93940486 ~ 93941471 (+)
G205688 NA other upstream 686783 93810360 ~ 93812169 (+)
G205683 LOC106573085 other upstream 700016 93796082 ~ 93798936 (+)
G206850 NA other downstream 52988 94557169 ~ 94562224 (+)
G206908 NA other downstream 127648 94631829 ~ 94632267 (+)
G206926 NA other downstream 201765 94705946 ~ 94706248 (+)
G208404 NA other downstream 1723612 96227793 ~ 96228463 (+)
G208836 NA other downstream 2108248 96612429 ~ 96613459 (+)

Expression


Co-expression Network