LOC118944177


Basic Information

Item Value
gene id LOC118944177
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94510373 ~ 94510614 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039488.1
AACATGCTCCTTAGATCCACCTCTGGGGGGGCGCTCCTGGTCTGAgtctgctatctctctctctctctctgagtgttgacTGCAGCTCCAGCCCAGACGCTCCCAACAGCTTTCTGGCTGTACAGTTGGAGGTGCTTGAGTCATTGGTGTGTGAGAACAGTCTACCTGCTCCTCAGCCCACTCCCTGCACTGGCACCCTCGTTGGAAAATGACCAGTGCAGACAGGCTGGGGAGCGGACAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039488.1 True 242 mRNA 0.57 1 94510373 94510614

Neighbor

gene id symbol gene type direction distance location
LOC110500169 lap2b coding upstream 6192 94498952 ~ 94504181 (+)
LOC110500139 LOC106561672 coding upstream 105853 94391364 ~ 94437682 (+)
LOC110500101 LOC106561643 coding upstream 192718 94300169 ~ 94317655 (+)
zgc:136858 LOC106561644 coding upstream 210329 94270560 ~ 94300044 (+)
LOC110500081 NA coding upstream 241622 94264009 ~ 94268751 (+)
LOC118944176 NA coding downstream 1992 94512606 ~ 94512848 (+)
LOC110500186 LOC106561670 coding downstream 3947 94514561 ~ 94520141 (+)
LOC110500215 LOC106561668 coding downstream 19027 94529641 ~ 94541962 (+)
LOC110500196 LOC106561667 coding downstream 31353 94539657 ~ 94556385 (+)
LOC110500230 LOC106561666 coding downstream 77921 94588535 ~ 94602636 (+)
G206844 NA non-coding upstream 5734 94504437 ~ 94504639 (+)
G206556 NA non-coding upstream 20219 94488578 ~ 94490154 (+)
G206555 NA non-coding upstream 22041 94488131 ~ 94488332 (+)
G206554 NA non-coding upstream 28062 94482072 ~ 94482311 (+)
G206553 NA non-coding upstream 28404 94481759 ~ 94481969 (+)
G206858 NA non-coding downstream 15958 94526572 ~ 94527078 (+)
G206859 NA non-coding downstream 16822 94527436 ~ 94528029 (+)
G206851 LOC105030512 non-coding downstream 52359 94562973 ~ 94563894 (+)
G206896 NA non-coding downstream 102499 94613113 ~ 94613397 (+)
G206389 LOC106561642 other upstream 408501 94100979 ~ 94101872 (+)
G206285 NA other upstream 568902 93940486 ~ 93941471 (+)
G205688 NA other upstream 698204 93810360 ~ 93812169 (+)
G205683 LOC106573085 other upstream 711437 93796082 ~ 93798936 (+)
G206850 NA other downstream 46555 94557169 ~ 94562224 (+)
G206908 NA other downstream 121215 94631829 ~ 94632267 (+)
G206926 NA other downstream 195332 94705946 ~ 94706248 (+)
G208404 NA other downstream 1717179 96227793 ~ 96228463 (+)
G208836 NA other downstream 2101815 96612429 ~ 96613459 (+)

Expression


Co-expression Network