LOC118944176


Basic Information

Item Value
gene id LOC118944176
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 94512606 ~ 94512848 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039487.1
AACACGCTCCTTAGATCCACCTCTGGGGGGCGCTCCTGGTCTGTTGAGTCtgctattatctctctctctctgagtgttgacTGCAGCTCCAGCCCAGACGCTCCCAGCAGCTTTCTGGCTGTACAGTTGGAGGTGCTTGAGTCATTGGCGTGTGAGAACAGTCTACCTGCTCCTCAGCCCACTCCCTGCACTGGCACCCTCGCTGGAAAATGACCAGTGCAGACAGGCTGGGGAGCGGACATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039487.1 True 243 mRNA 0.58 1 94512606 94512848

Neighbor

gene id symbol gene type direction distance location
LOC118944177 NA coding upstream 1992 94510373 ~ 94510614 (+)
LOC110500169 lap2b coding upstream 8425 94498952 ~ 94504181 (+)
LOC110500139 LOC106561672 coding upstream 108086 94391364 ~ 94437682 (+)
LOC110500101 LOC106561643 coding upstream 194951 94300169 ~ 94317655 (+)
zgc:136858 LOC106561644 coding upstream 212562 94270560 ~ 94300044 (+)
LOC110500186 LOC106561670 coding downstream 1713 94514561 ~ 94520141 (+)
LOC110500215 LOC106561668 coding downstream 16793 94529641 ~ 94541962 (+)
LOC110500196 LOC106561667 coding downstream 29119 94539657 ~ 94556385 (+)
LOC110500230 LOC106561666 coding downstream 75687 94588535 ~ 94602636 (+)
LOC110500246 NA coding downstream 125283 94638131 ~ 94665869 (+)
G206844 NA non-coding upstream 7967 94504437 ~ 94504639 (+)
G206556 NA non-coding upstream 22452 94488578 ~ 94490154 (+)
G206555 NA non-coding upstream 24274 94488131 ~ 94488332 (+)
G206554 NA non-coding upstream 30295 94482072 ~ 94482311 (+)
G206553 NA non-coding upstream 30637 94481759 ~ 94481969 (+)
G206858 NA non-coding downstream 13724 94526572 ~ 94527078 (+)
G206859 NA non-coding downstream 14588 94527436 ~ 94528029 (+)
G206851 LOC105030512 non-coding downstream 50125 94562973 ~ 94563894 (+)
G206896 NA non-coding downstream 100265 94613113 ~ 94613397 (+)
G206389 LOC106561642 other upstream 410734 94100979 ~ 94101872 (+)
G206285 NA other upstream 571135 93940486 ~ 93941471 (+)
G205688 NA other upstream 700437 93810360 ~ 93812169 (+)
G205683 LOC106573085 other upstream 713670 93796082 ~ 93798936 (+)
G206850 NA other downstream 44321 94557169 ~ 94562224 (+)
G206908 NA other downstream 118981 94631829 ~ 94632267 (+)
G206926 NA other downstream 193098 94705946 ~ 94706248 (+)
G208404 NA other downstream 1714945 96227793 ~ 96228463 (+)
G208836 NA other downstream 2099581 96612429 ~ 96613459 (+)

Expression


Co-expression Network