XLOC_020734


Basic Information

Item Value
gene id XLOC_020734
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 2795028 ~ 2825701 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042293
CGAATGTGTGAAGCTCTTCCCACAAGCAGTGCAGtgatacggtttctctccagtgtgactcCTCAAGTGTGATTTCAGGTATCTTGAAACACTGAATTTCTTGCCGCAGTATGAACActggtaaggtttctctccagtgtggatcctctcgTGTGGTTTCAGGTTTTGTGATaaactgaatctcttgtcgcagtgcgAACActggtaaggtttctctccagtgtggatcctcatgtgtttaatgAAAGTGCTTTTGCAGCTCAaagtctttccacactgagtgcaggtgaaactatTTACTGCTGTTCCATTCACTGAAATACTATCTTCAGTCTCTGATTggattttttctttacttttgacctgatgtttctcctcatcttcattCAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042293 True 390 lncRNA 0.43 2 2795028 2825701

Neighbor

gene id symbol gene type direction distance location
XLOC_020731 NA coding downstream 3538 2702802 ~ 2791490 (-)
XLOC_020733 NA coding downstream 5490 2769742 ~ 2789538 (-)
XLOC_020732 NA coding downstream 11144 2762090 ~ 2783884 (-)
XLOC_020728 NA coding downstream 149018 2569177 ~ 2646010 (-)
XLOC_020729 NA coding downstream 171154 2599019 ~ 2623874 (-)
XLOC_020737 aqp12 coding upstream 49137 2874838 ~ 2886937 (-)
XLOC_020738 NA coding upstream 63962 2889663 ~ 2892546 (-)
XLOC_020739 pak2b coding upstream 69810 2895511 ~ 2929156 (-)
XLOC_020740 pigx coding upstream 105639 2931340 ~ 2937529 (-)
XLOC_020741 ing5a coding upstream 123410 2949111 ~ 3092136 (-)
XLOC_020747 NA non-coding upstream 521812 3347513 ~ 3347884 (-)
XLOC_020749 NA non-coding upstream 914885 3740586 ~ 3741284 (-)
XLOC_020750 NA non-coding upstream 1057906 3883607 ~ 3886684 (-)
XLOC_020752 CU074310.1 non-coding upstream 1486102 4311803 ~ 4313118 (-)

Expression


Co-expression Network