Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944198 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 95271093 ~ 95271272 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOC569167 protein, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118944198 | True | 180 | mRNA | 0.41 | 1 | 95271093 | 95271272 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110502417 | LOC106561684 | coding | downstream | 146546 | 95097379 ~ 95124547 (-) |
| LOC110500368 | LOC105021811 | coding | downstream | 250664 | 95015675 ~ 95020429 (-) |
| trnay-gua | NA | coding | downstream | 261402 | 95009602 ~ 95009691 (-) |
| LOC110500345 | LOC106561680 | coding | downstream | 296180 | 94959918 ~ 94974913 (-) |
| LOC110500320 | LOC106604557 | coding | downstream | 489725 | 94777558 ~ 94781368 (-) |
| parietopsin | LOC106561711 | coding | upstream | 357177 | 95628449 ~ 95632062 (-) |
| LOC110502485 | LOC106561707 | coding | upstream | 364624 | 95635896 ~ 95664503 (-) |
| LOC110500466 | nampt | coding | upstream | 432087 | 95703359 ~ 95721115 (-) |
| LOC110533932 | NA | coding | upstream | 610859 | 95882131 ~ 95883679 (-) |
| LOC110502500 | LOC106561698 | coding | upstream | 780030 | 96051302 ~ 96092405 (-) |
| G207592 | NA | non-coding | downstream | 3103 | 95267522 ~ 95267990 (-) |
| G207589 | LOC106561689 | non-coding | downstream | 10000 | 95259138 ~ 95261093 (-) |
| G207575 | NA | non-coding | downstream | 30207 | 95240523 ~ 95240886 (-) |
| G207524 | NA | non-coding | downstream | 70439 | 95154198 ~ 95200654 (-) |
| G207533 | NA | non-coding | downstream | 96667 | 95173288 ~ 95174426 (-) |
| G207836 | NA | non-coding | upstream | 25302 | 95296574 ~ 95296959 (-) |
| G207869 | LOC106561691 | non-coding | upstream | 63990 | 95335262 ~ 95347544 (-) |
| G207867 | NA | non-coding | upstream | 84936 | 95356208 ~ 95359859 (-) |
| G207875 | NA | non-coding | upstream | 90988 | 95362260 ~ 95362626 (-) |
| G207859 | LOC106561692 | non-coding | upstream | 101203 | 95372475 ~ 95382273 (-) |
| G207340 | LOC105021815 | other | downstream | 494737 | 94762662 ~ 94776356 (-) |
| G207249 | NA | other | downstream | 641354 | 94629437 ~ 94629739 (-) |
| G207244 | LOC100194703 | other | downstream | 653861 | 94616915 ~ 94617232 (-) |
| G206750 | NA | other | downstream | 942910 | 94327910 ~ 94328183 (-) |
| G206744 | LOC106561643 | other | downstream | 957175 | 94313390 ~ 94313918 (-) |
| G207858 | LOC106561692 | other | upstream | 106451 | 95377723 ~ 95408714 (-) |
| G207959 | NA | other | upstream | 252696 | 95523968 ~ 95524227 (-) |
| G207884 | NA | other | upstream | 332956 | 95604228 ~ 95609786 (-) |
| G207876 | LOC106561706 | other | upstream | 410765 | 95680851 ~ 95686864 (-) |
| G208077 | NA | other | upstream | 558102 | 95829374 ~ 95832362 (-) |
