LOC110500522 (gpr22)


Basic Information

Item Value
gene id LOC110500522
gene name gpr22
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 95993206 ~ 96011204 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960062.1
agagagtgcagcagagacagagagagagagagcgagagagagagggagagagagagagagagagagatactaggaGCACGTCTGTTTTTATTTCACTCCACACAGTGAGGCTGGAGAGAGCTCATGCCACAGAGTTGATGAGGTGGATAGCTGCTTGTTCACACCACACCGTGTgtgcagagacaaagagaggatgAAGACAAGAGAGAGCACGGGAAAATAAAAGAGCAGGATTTTTTTCTGTGGTTATTTTTTTTCTCTGTTgtcaagagagacagacagacacgggaCGAGAGGAAAAGCAGAAAACCCTTACTGCATGGGACACCGACCTCGTTCTAATCCTGGGTTTACTTCTGCCTGGAAGTGAGGAGAAGTAATTGGTTGGAATCTAAGAGCTCAGGTGCTTTGGAGCTTGTAGGATTTCTATTGTACTGGACCAAGACAACAGTACAGGATCAAGACAACAGTACTGGATCAAGACAACAGTACTGGATCAAGACAACAGTACTGGACCAAGACAACAGTACTGGACCAAGACAACAGTACAGGATCAAGACAACAGTACTGGATCAAGACAACAGTACTGGATCAAGACAACAGTACTGGACCAAGACAACAGTACTGGACCAAGACAACAGTATTGGATCAAGACGGGACAGTACGGGCAGTGGACCAGCTCATCATCGTCTGTGTGTTTACTCAGCCTGgacGGTGAGTAAGAGGGGGACGTGACTGAAGGACAGACTGATGATGGTTTGGTCTGTGTGGTCGTCTCATACAACTTGTATCGTCTTATCCAATCCCTGCCAAGGACTGTTATCTTCTTGACCAATCCCTGTCCATGACAGTTATCCTCTTGACCAATCACTGTCCAGGACTGTTATCCTCTcgaccaatacattttgaggAGTTTTATCCTGGTATAAATCACAGAGgATAATGCATATCCTTCCCCCTCTGGAGAGAGAAGAAGGCACCATGAGCAACGTCACCGTCACCGACAACGCAGCCGAGCCCATCAGCAGAACCAGTGCTCCAGCCACGCCCTACCCATACCCCTACCCCATCTCCTTCCAGGTGTCCCTGACCGGCTTCCTGATGCTGGAGATCGTGCTGGGCCTGAGCTCCAACCTCACCGTGCTGGCCCTGTACTGCATGAAGTCCAACCTGATCTCCTCGGTCTCCAACATCGTCACCATGAACCTTCACGTCctggatgtgttagtgtgtgtctgctGCATCCCACTGAccatggtggtgttgttgttgtctctggAGGGGGATACAGCCTTGGTTTGTTGCTTCCACGAGGCCTGTGTGTCGTTCGCTAGTGTCGGCACCGCAGCCAACGTACTCGCCATTACCCTGGACCGGTACGACATCTCTGTGAAACCGGCGAATAGAGTCCTAACGATGGGCCGAGCCCTGGCTCTGCTGGCCACCATTTGGGTGCTGTCGTTCCTCAGTTTCCTGGTGCCTTTCATGGAGGTGGGGTTCTTCGCCCCAGGCCAGTCAGAGCTGAACCAGACTCAAGCGGATGTAGTCACAGTGGCCCACACCAACCAATACTACACAGAGTTAGGACTCTACTATCACCTACTGGTCCAGAtccccatcttcttcttcacTGCTGTTGTGATGCTCGTCACTTATTCCAAGATCCTCCAGGCGCTCAACATCCGCATTGGGACACGCTTTCACACAGCGTCGCAGAAGAAGAAGGCCAGGAGGAAAAAAGGTCCCTCCATGACGGCTATGACGTCACAGGCCACGGACGGGGCCATGGACCCATCCGAGCCCAGCGGCCGTGCTCTACCCCCGATGGGCATGCGGACCTCCGTCTCCCTCATCATTGCGTTGAGACGAGCGGTTAAACGCCACCGGGAGCGACGAGAACGCCAGAAACGAGTCTTCAGGATGTCGCTGCTCATCGTGTCGACCTTCCTGCTCTGCTGGACTCCCATAACCGCCCTCAACACGGTCATCTTGACCGTAGGCCCCAGCGACTTCACGGTCAAGCTGCGGTTGGGCTTCCTGGTCATGGCATACGGGACGACCATCTTCCATCCGCTTCTCTACGCTTTCACCAGGCAGAAGTTCCAGAAGGCTCTGAAGAGTAAGATGAAGAAGAGGGTGGTGAGCATCATAGAGGCTGACCCGCTGCCCAACAACGCGGTCATACGTAACTCCTGGATTGACCCCAAAAGGAACAAGAAGGTCACCATCAACGAGGATGCCGAGGCCAGGCAAAAATGTCTGCAGTCTTCAGAGGATGCTGTGGAATGACAGTGAATACTTAGAGACCTTGTCCAGAG
>XM_021577932.2
cacacacacacgcacacacacacacacatacacgcacatacCTAAACACACgtacgcaggcacacacacatacgattACACctgcagaactgagcgatttccactagatgggccagctATATCATAAACATTCCTGAAAAcacaaatgtgctttttggtcttcatttcAAAGCTTATGTTTAGGCATCAGGGTTAATTAACAGTCAAGTCAAGGTTAGGGTTACTTTTAAAATTGTATGATTTTGTGGTTGTGCAAGCTGGTGACAAACTCTGCagagattcatgacaataaatgccagcctgccacaaatacacaaataaatgacacaaatatgGGAATGTATGATTTTGATTGGCTGAAAACCGCCCACTGTTTGGAGGAAAATCTGAAATGGAGGAACATAGGatttttttgtgattttttaGTGAGTGCGACGGACTGAACAATTGGACTAAAGGAGTTACTGTATATTTTCTTCAACCGAGGATTTGGATTCCACAGTCTACCGTTGGATTCTACAGTCTACCGTTGGATTCTACAGTCTACCGTTGGATTCCACAGTCTACCGTTGGATTCCACAGTCAACCGTTGGATTCCACAGTCTACCGTTGGATTCCACAGTCGACCATTGGATTCCACAGTCTACCGTTGGATTCTACAGTCTACCGTTGGATTCCACAGTCTACCATTGGATTCCACAGTCTACCATTGGATTCCACAGGCTACCGTTGGATTCTACAGTCTACCGTTGGATTCCACAGTCTACCGTTGGATTCCACAGTCTACCGTTGGATTCCACAGTCTACCGTTGGATTCCACAGTCTACCATTGGATTCTAAAGGATTTTTAAATTCAGTTCCATTCAATTATTTTGACTTGATAGGCCGGCATTCAGTGAATTCAGACCCACTGTAGAGGAAGAAtctttgtcttgtttttttgtgCAGCGGCCTCTGTAGTAGTGGCTGTGGCTTCTGCCACGCGTGGGAATAATACCGTGGGTTCAGGAACAGGAGATCCAGAGGCTCCGAGAGTTTATCTGTGATCCAGTCATCAGCGCTCCCACCATCACAAAAACAACgctatagagatacagacagagtttatttcacttgcttagcCAATgtatatttcccatgccaataaagccccattgaattgaatagagagagagagagagagagagagagagagagagagagagatatccagGTGtgttctcttccctccctctctgcagtACTTGGCATCCTCGTCGTGATATTCTATAGACACCCAAATATTCTAGTCATTAACGACTGGATGAAGCCCCCAGCCAATTAGCAGTCCTGTCCAATCCACCAGTCCAATAGTTGCTTGCGTTGCATTTAGTGGTTCATTGGTGGAAGAGAGGAGCATTGCTGGTGGCAGGACAGAGAGGTGCTTCTCTGGCCTGGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGAAGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCAGGGTGCATAGCAGCCTCCCTGGAAGCATAGCAGCCTTCCAGGAAGCATAGCAGCCTCCCTGGGCGTATAGCAGCCTTCCTGGGTGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGAAACATAGCAGCCTCCCTGGAAACATAGCAGCCTCCCTGAGTGCATAGCAGCCTCCCTGGAAACATAACAGCCTCCCTGAGTGCATAGCAGCCTCCCTGAGTGCATAGCAGCCTCCCTGGAAACATAGCAGCCTCCCTGGGTGCATAGCAGCCTCAGTGGAAGCATATAAGCCTCCCTGGGTGCATAGCAACCTCCCTGGGTGCATAGCAGCCTCACTGGAAGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGGTACATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGGCGCATAGCAGCCTTCCTGGGTGCATAGCAGCCTCCCTGGAAACATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGAAACATAGCAGCCTCCCTGAGTGCATAGCAGCCTCCCTGGAAACATAGCAGCCTCCCTGGGTGCATAGCAGCCTCAGTGGAAGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGAAGCATAGCAGCCTACCTGGGTGCATAGCAGCCTCCCTGGGTACATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGAAGCATAGCAGCCTCCCTGGAAGCATAGCAGCCTCCCTGGGTGCATAGCAGCCTCCCTGGAATCATAGCAGCCTCCCTGGAAGCATAGCAGCCTCCCTGGGTGCATAACAGCCTCCCTGGAAGCATAGCAACCTCCCTGGGtgggtgaagaggagaggagcagtgtTAGTAGAAGATCCTTGTTCTCAGGACGATAGCTCAGAGCGTCTTGATTGGTAGGCTTAGAGAGGATCCTTCTTCTGTGGTGGTCTCATGGTGACATTATACCTGAATCGGATGCCTGTCTGTGTGGGTCTAGCTGGGGAGCTCCCTGACTACGGAGCCTTGCTGGGGCTCAGATAGAGCTGGAGAGAAGGgATAATGCATATCCTTCCCCCTCTGGAGAGAGAAGAAGGCACCATGAGCAACGTCACCGTCACCGACAACGCAGCCGAGCCCATCAGCAGAACCAGTGCTCCAGCCACGCCCTACCCATACCCCTACCCCATCTCCTTCCAGGTGTCCCTGACCGGCTTCCTGATGCTGGAGATCGTGCTGGGCCTGAGCTCCAACCTCACCGTGCTGGCCCTGTACTGCATGAAGTCCAACCTGATCTCCTCGGTCTCCAACATCGTCACCATGAACCTTCACGTCctggatgtgttagtgtgtgtctgctGCATCCCACTGAccatggtggtgttgttgttgtctctggAGGGGGATACAGCCTTGGTTTGTTGCTTCCACGAGGCCTGTGTGTCGTTCGCTAGTGTCGGCACCGCAGCCAACGTACTCGCCATTACCCTGGACCGGTACGACATCTCTGTGAAACCGGCGAATAGAGTCCTAACGATGGGCCGAGCCCTGGCTCTGCTGGCCACCATTTGGGTGCTGTCGTTCCTCAGTTTCCTGGTGCCTTTCATGGAGGTGGGGTTCTTCGCCCCAGGCCAGTCAGAGCTGAACCAGACTCAAGCGGATGTAGTCACAGTGGCCCACACCAACCAATACTACACAGAGTTAGGACTCTACTATCACCTACTGGTCCAGAtccccatcttcttcttcacTGCTGTTGTGATGCTCGTCACTTATTCCAAGATCCTCCAGGCGCTCAACATCCGCATTGGGACACGCTTTCACACAGCGTCGCAGAAGAAGAAGGCCAGGAGGAAAAAAGGTCCCTCCATGACGGCTATGACGTCACAGGCCACGGACGGGGCCATGGACCCATCCGAGCCCAGCGGCCGTGCTCTACCCCCGATGGGCATGCGGACCTCCGTCTCCCTCATCATTGCGTTGAGACGAGCGGTTAAACGCCACCGGGAGCGACGAGAACGCCAGAAACGAGTCTTCAGGATGTCGCTGCTCATCGTGTCGACCTTCCTGCTCTGCTGGACTCCCATAACCGCCCTCAACACGGTCATCTTGACCGTAGGCCCCAGCGACTTCACGGTCAAGCTGCGGTTGGGCTTCCTGGTCATGGCATACGGGACGACCATCTTCCATCCGCTTCTCTACGCTTTCACCAGGCAGAAGTTCCAGAAGGCTCTGAAGAGTAAGATGAAGAAGAGGGTGGTGAGCATCATAGAGGCTGACCCGCTGCCCAACAACGCGGTCATACGTAACTCCTGGATTGACCCCAAAAGGAACAAGAAGGTCACCATCAACGAGGATGCCGAGGCCAGGCAAAAATGTCTGCAGTCTTCAGAGGATGCTGTGGAATGACAGTGAATACTTAGAGACCTTGTCCAGAG
>TU235752
AGACAACAGTACTGGATCAAGACAACAGTACTGGATCAAGACAACAGTACTGGACCAAGACAACAGTACTGGACCAAGACAACAGTATTGGATCAAGACGGGACAGTACGGGCAGTGGACCAGCTCATCATCGTCTGTGTGTTTACTCAGCCTGgacGGTGAGTAAGAGGGGGACGTGACTGAAGGACAGACTGATGATGGTTTGGTCTGTGTGGTCGTCTCATACAACTTGTATCGTCTTATCCAATCCCTGCCAAGGACTGTTATCTTCTTGACCAATCCCTGTCCATGACAGTTATCCTCTTGACCAATCACTGTCCAGGACTGTTATCCTCTcgaccaatacattttgaggAGTTTTATCCTGGTATAAATCACAGAGGTGAGGCATCCTCTAATGGACTCACTGTTATCCCCTTCTTTATGACCATGACCTTCTACTTCtgaatcacacacacaggcacacacgcacgcacaca

Function

symbol description
gpr22 Enables G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane.

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960062.1 False 2318 mRNA 0.52 5 95993206 96011204
XM_021577932.2 False 4005 mRNA 0.53 4 96001330 96011204
TU235752 True 479 lncRNA 0.47 2 95993762 96001239

Neighbor

gene id symbol gene type direction distance location
LOC118936882 NA coding upstream 105092 95885587 ~ 95888114 (+)
LOC110500485 hbp1 coding upstream 230063 95750879 ~ 95763143 (+)
LOC110500475 prkar2b coding upstream 245990 95731857 ~ 95747216 (+)
LOC110502494 cdhr3 coding upstream 294466 95688561 ~ 95698740 (+)
grp94 LOC106561706 coding upstream 306351 95678926 ~ 95686855 (+)
LOC110500533 LOC106561700 coding downstream 23016 96034220 ~ 96043570 (+)
LOC110500557 LOC106561743 coding downstream 960187 96971391 ~ 97028188 (+)
LOC110500585 LOC106561739 coding downstream 1070731 97081935 ~ 97085041 (+)
LOC110500594 LOC106561738 coding downstream 1074725 97085929 ~ 97087755 (+)
LOC110500611 LOC106561734 coding downstream 1517503 97528707 ~ 97596323 (+)
G208232 NA non-coding upstream 13723 95979156 ~ 95979483 (+)
G208227 NA non-coding upstream 19354 95973628 ~ 95973852 (+)
G208224 NA non-coding upstream 20478 95972500 ~ 95972728 (+)
G208117 NA non-coding upstream 35508 95863858 ~ 95957698 (+)
G208093 NA non-coding upstream 147083 95845888 ~ 95846123 (+)
G208255 NA non-coding downstream 21723 96032927 ~ 96033141 (+)
G208257 NA non-coding downstream 33524 96044728 ~ 96045086 (+)
G208262 NA non-coding downstream 34007 96045211 ~ 96046999 (+)
G208263 LOC106561698 non-coding downstream 37111 96048315 ~ 96052238 (+)
G208267 NA non-coding downstream 46798 96058002 ~ 96058230 (+)
G206926 NA other upstream 1286958 94705946 ~ 94706248 (+)
G206908 NA other upstream 1360939 94631829 ~ 94632267 (+)
G206850 NA other upstream 1430982 94557169 ~ 94562224 (+)
LOC110500139 LOC106561672 other upstream 1555524 94391364 ~ 94437682 (+)
G206389 LOC106561642 other upstream 1891334 94100979 ~ 94101872 (+)
G208404 NA other downstream 216589 96227793 ~ 96228463 (+)
G208836 NA other downstream 601225 96612429 ~ 96613459 (+)
G209586 NA other downstream 1475272 97486476 ~ 97486772 (+)
G209591 NA other downstream 1607413 97618617 ~ 97619089 (+)
LOC110500822 LOC106561728 other downstream 1686907 97695939 ~ 97711108 (+)

Expression


Co-expression Network