LOC110500576


Basic Information

Item Value
gene id LOC110500576
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 96633841 ~ 96640404 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110500576
ccgggttaggctgtcattgtaaataagaatttgttctgaaactgattttcctagttaaataaaggtgaacaaaaatatatagtgGTTTGCAAACCCGTGATTTCTCCAACATGTGTAACGCTTCAGTGAGTGAAATTACGTTGTTACTATTTTCCCCGCCCCGCAACGCTTCTGTCCGACGTGTACACCGCTCCAGTTGTGGGAAATGACGCCGCGCAGGACACGCGTGGTGAAAATAGTCATTGGTTTTCAGTAAAAATAACTACCGCTTCTTCTGAAATGCAAGCTCCCGCATTGAGCGAGGaaaacagtgaaacgcttacagAAAAGACCAAGGAGGAAAAGCAACCGGACACCATTTCAGATGAACCGGGTGTTAGCAGCGTAGACGCACTGCTGAACATGGAAGTAAGGATCGCGGAATGCGGGCAAGACGGAGAAGAAGGGGACGGGAAACCTGCTTCAGAGGCAGATGAGGAGGCTGCGGAAGCGGTGACCGCGGCGACAACGGTCGCAGCAGCAACAGGGGTCgcagataatgatgatgatgaagaaaaGACGATGGGATGCAAACTTGCTAAAACAGATGAGGATTGCACGGACCCTGAgaaacagagtagcctagtggacGGTGGTGAGAATAGCGTGACAGTTAAAGATACGGCGAAGAAAAGTAAACCAGAAGAACAGCGAGAGGAGAGCAAGTCGCCCGTCACAGTGAGTGACTGTGTGGGAAAAAGCAAAGTCCGTGACGATGCTCCGGAGCCCGGGCAGGAGAAAACAAGCACCAGAGGTGGGGACCGCGAGGAGCTGGTGGTGGGAGACGAGGCCAGCGTAGAGATGTCATCATCGGACGGAGAGCCACTCAGCCGATGGATTCAGAGGACAGtatcAGCAGTACCCTGATGGACATGGAGAGCACGGTATCCAGCGGACGCTCCACCCCTGCCATGATGAATGGGCAGGGCAGTGCCACTCCAGTACCAAGGGCCAGGCAGTGGGGAACAGCTGCTGCTGGGACCAACGTGGCCTCTGTTTCACCTGCAGCCCAGACCTGTCTGAACACATCAGGGGCCTGCACGTCgacggacagagaggaggggtgtttgtgtgtctgtggaaGGGCTGTAAGGTGTACAACACTCCGTCCACCAGTCCAAGCTGGCTCCAGAGACACATGCTGACACACATGGATGGAATCCCTGcggtaattgaacccacaatttTAGTATTGTTAGCAGGTTTCGGCGGTTTTCTGAATGGTGACCTGCTTATCACTGACCTctgttgccaaagcaagtgaggtagataatatacaatatCTCTCTCGTAGTGTGTGGTGGGGGGCTGCAATGCCAGCTTTGCATCGTAGGGGGGGCTAGCGCGCCACGTTCCCACCCACTTCAGTCTGCTCCTCTAAGCGGTCCAGTCAGTCTAGACTCAAGGAAGAGTCTCCCTCTAAAGCTGGGCTTACTAAGAGGAAGAAACGAACGCAGATGAACAAACGCAGGCGCTCGCTACGTACGTACCTactacagtgctgtgtgtgtgtgtgaaaaatctaattttatttgtcacacgcttcataaacaacaggtgtagactaacagtgaaatactaaCAGGTATTTGTTCAACAATGCAGAGATAAAGATACGAAATAGAAACAATgaaacaaggaataaatacacagtcaataacaataacaagttaAAATAACATGTCTATTTACAGGAAGTACCGAGTCGAAGTGCAAGGGTAGGAGGTAATTGAAGTAACGACAGTAACATTTCAAATGAATAGCCTGGCTGTTTATTTTCTTAAATCACTAAACACAACAGGCGCTTATTAAAGACAGGCTTCTAAAATTTCCTTCATGACCTCAGCTTTTGCTGAGcgatcacaacacgcaggttaaaatatcaaaacaaacactgaaccaattacattcatttggggacaggtcgaaaaatcattaaacatgtatgtcaa

Function

NR:

description
PREDICTED: zinc finger protein aebp2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110500576 True 1991 mRNA 0.48 3 96633841 96640404

Neighbor

gene id symbol gene type direction distance location
LOC110502509 LOC106561697 coding downstream 263635 96129727 ~ 96370206 (-)
LOC110502500 LOC106561698 coding downstream 541436 96051302 ~ 96092405 (-)
LOC110533932 NA coding downstream 750162 95882131 ~ 95883679 (-)
LOC110500466 nampt coding downstream 912726 95703359 ~ 95721115 (-)
LOC110502485 LOC106561707 coding downstream 969338 95635896 ~ 95664503 (-)
LOC110500541 LOC106561741 coding upstream 6726 96647130 ~ 96897073 (-)
pik3c2g LOC106561742 coding upstream 379187 97019591 ~ 97077900 (-)
LOC110502515 reln coding upstream 448803 97089207 ~ 97387953 (-)
LOC118937309 NA coding upstream 853940 97494344 ~ 97496498 (-)
LOC118944190 NA coding upstream 981602 97621775 ~ 97675000 (-)
G209267 NA non-coding downstream 14610 96617498 ~ 96619231 (-)
G209254 NA non-coding downstream 36061 96597471 ~ 96597780 (-)
G209252 NA non-coding downstream 42831 96589740 ~ 96591010 (-)
G209246 NA non-coding downstream 43347 96585047 ~ 96590494 (-)
G209237 NA non-coding downstream 60470 96572979 ~ 96573371 (-)
G209282 NA non-coding upstream 14218 96654622 ~ 96659217 (-)
G209298 NA non-coding upstream 56533 96696937 ~ 96697713 (-)
G209346 NA non-coding upstream 198741 96839145 ~ 96840206 (-)
G209348 NA non-coding upstream 205347 96845751 ~ 96846592 (-)
G209349 NA non-coding upstream 206330 96846734 ~ 96847325 (-)
G208658 NA other downstream 211617 96421866 ~ 96422224 (-)
G208472 NA other downstream 499369 96134077 ~ 96134472 (-)
G208077 NA other downstream 801479 95829374 ~ 95832362 (-)
G207876 LOC106561706 other downstream 946977 95680851 ~ 95686864 (-)
G207884 NA other downstream 1024055 95604228 ~ 95609786 (-)
G209560 NA other upstream 776417 97416821 ~ 97417188 (-)
G209802 NA other upstream 860768 97501172 ~ 97502394 (-)
G209841 NA other upstream 978455 97618859 ~ 97619212 (-)
LOC118936884 NA other upstream 1503916 98127948 ~ 98145517 (-)
LOC118943885 LOC106561728 other upstream 2278044 98914015 ~ 98946069 (-)

Expression


Co-expression Network