Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118943869 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 97636136 ~ 97691714 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| E3 ubiquitin/ISG15 ligase TRIM25-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005039177.1 | False | 527 | mRNA | 0.44 | 2 | 97690525 | 97691443 |
| TU237668 | True | 572 | lncRNA | 0.40 | 2 | 97636136 | 97691714 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118943865 | LOC106593246 | coding | downstream | 693 | 97626323 ~ 97690421 (-) |
| LOC118944194 | NA | coding | downstream | 7407 | 97682938 ~ 97683118 (-) |
| LOC118943862 | NA | coding | downstream | 30061 | 97655151 ~ 97660464 (-) |
| LOC118944196 | NA | coding | downstream | 42477 | 97647861 ~ 97648048 (-) |
| LOC118944213 | NA | coding | downstream | 64628 | 97625781 ~ 97625897 (-) |
| LOC118944207 | NA | coding | upstream | 26297 | 97717740 ~ 97717837 (-) |
| LOC118944209 | NA | coding | upstream | 28231 | 97719674 ~ 97719773 (-) |
| LOC118943868 | NA | coding | upstream | 30549 | 97699305 ~ 97723186 (-) |
| LOC118944208 | NA | coding | upstream | 64187 | 97755630 ~ 97755727 (-) |
| LOC118944211 | NA | coding | upstream | 66121 | 97757564 ~ 97757663 (-) |
| G209860 | NA | non-coding | downstream | 1420 | 97652692 ~ 97689105 (-) |
| G209834 | NA | non-coding | downstream | 6769 | 97647549 ~ 97683756 (-) |
| G209888 | NA | non-coding | downstream | 8447 | 97646404 ~ 97682078 (-) |
| G209891 | NA | non-coding | downstream | 9404 | 97680551 ~ 97681121 (-) |
| G209845 | NA | non-coding | upstream | 18361 | 97709804 ~ 97746811 (-) |
| G209893 | NA | non-coding | upstream | 22748 | 97714191 ~ 97750984 (-) |
| G209844 | NA | non-coding | upstream | 35496 | 97726939 ~ 97771450 (-) |
| LOC118943870 | NA | non-coding | upstream | 68446 | 97759882 ~ 97761086 (-) |
| G209841 | NA | other | downstream | 71313 | 97618859 ~ 97619212 (-) |
| G209802 | NA | other | downstream | 188131 | 97501172 ~ 97502394 (-) |
| G209560 | NA | other | downstream | 273337 | 97416821 ~ 97417188 (-) |
| G208658 | NA | other | downstream | 1268301 | 96421866 ~ 96422224 (-) |
| G208472 | NA | other | downstream | 1556053 | 96134077 ~ 96134472 (-) |
| LOC118936884 | NA | other | upstream | 452877 | 98127948 ~ 98145517 (-) |
| LOC118943885 | LOC106561728 | other | upstream | 1227005 | 98914015 ~ 98946069 (-) |
| LOC118943882 | LOC106561728 | other | upstream | 1251031 | 98936783 ~ 98944041 (-) |
| G210765 | NA | other | upstream | 1334289 | 99025732 ~ 99026118 (-) |
| G211127 | NA | other | upstream | 1431790 | 99123233 ~ 99123658 (-) |
| LOC118944190 | NA | coding | downstream | 13952 | 97621775 ~ 97675000 (-) |
| LOC118937309 | NA | coding | downstream | 139638 | 97494344 ~ 97496498 (-) |
| LOC110502515 | reln | coding | downstream | 248183 | 97089207 ~ 97387953 (-) |
| pik3c2g | LOC106561742 | coding | downstream | 558236 | 97019591 ~ 97077900 (-) |
| G209858 | NA | non-coding | downstream | 18112 | 97617666 ~ 97618024 (-) |
| G209875 | NA | non-coding | downstream | 24033 | 97609516 ~ 97612103 (-) |
| G209883 | NA | non-coding | downstream | 31759 | 97604157 ~ 97604377 (-) |
| G209881 | NA | non-coding | downstream | 36539 | 97599359 ~ 97599597 (-) |
| G209874 | NA | non-coding | downstream | 37003 | 97595728 ~ 97599133 (-) |
