LOC118936885


Basic Information

Item Value
gene id LOC118936885
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98798732 ~ 98799869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934508.1
ATGAATCCCGGGTTCAACTTTTACTTTCAGAATGGAATCAACACCAATCCTGGTTACAGGACTGACCCCAATCCTGGTTACTGGATTGACCCCAATCATGGTTACTGGACTGACCCCAATCCTGGTTACTGGACTGACCCCAATCCTGGTTACAGGACTGACCCCAATCCTAGCTACGGGGCTGACCCCAATCCTGGTTACTGGACTGACCCCGATGCTGGTTACTGGACTGACCCCAATCCTGGTTACTGGACTGACCCCAATCCTGGTTACAGGACTGATCCCAATGCTGGTTACTGGACTGACCCCAATCCTGGTTACTGGACTGACCCCAATGCTGGTTACTGGACTGACCCCAATGCTGGTTACTGGACTGACCCTGGTTACTGGACTGACCCTGGTTACTGGACTGACACCAATCCTGGTTACTGGACTGACCCCAATCCTGGTTACAGGACTGACCCCAATCCTGGTTACTTGACTGACCCCAATCCTGGTTACTTGACTGACCCCAATCCTGGTTACTTGACTGACCCCAATCCTGGTTACTTGACTGACCCCAATCCTGGTTACTgtactgaccccaaccctggttacTGA

Function

NR:

description
PREDICTED: small proline-rich protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934508.1 True 600 mRNA 0.52 2 98798732 98799869

Neighbor

gene id symbol gene type direction distance location
LOC110500756 pk coding upstream 165624 98613750 ~ 98633108 (+)
LOC110500731 LOC106561719 coding upstream 225968 98540412 ~ 98572764 (+)
gp137 gp137 coding upstream 344766 98437885 ~ 98453966 (+)
LOC118943874 tspan18 coding upstream 529289 98161662 ~ 98269443 (+)
LOC118936883 NA coding upstream 706220 98091289 ~ 98092512 (+)
LOC110500657 parp16 coding downstream 54816 98854685 ~ 98868361 (+)
LOC110510476 LOC106561728 coding downstream 98626 98897524 ~ 98944948 (+)
LOC118944192 NA coding downstream 107573 98907442 ~ 98907622 (+)
LOC118944193 NA coding downstream 130488 98930357 ~ 98930537 (+)
LOC118943887 NA coding downstream 149607 98949476 ~ 98950379 (+)
G210457 NA non-coding upstream 4382 98790461 ~ 98794350 (+)
G210453 NA non-coding upstream 9418 98789091 ~ 98789314 (+)
G210452 NA non-coding upstream 9750 98787445 ~ 98788982 (+)
G210450 NA non-coding upstream 12400 98785878 ~ 98786332 (+)
G210449 NA non-coding upstream 13191 98784322 ~ 98785541 (+)
G210422 NA non-coding downstream 13608 98813477 ~ 98819856 (+)
G210465 NA non-coding downstream 20757 98820626 ~ 98822180 (+)
G210466 NA non-coding downstream 22390 98822259 ~ 98824461 (+)
G210472 NA non-coding downstream 35003 98834872 ~ 98835186 (+)
G210276 scamp5 non-coding downstream 46936 98846805 ~ 98854673 (+)
G210408 NA other upstream 98340 98697168 ~ 98700392 (+)
G209759 NA other upstream 840896 97957244 ~ 97958896 (+)
G209636 NA other upstream 1025967 97740061 ~ 97772765 (+)
LOC110500822 LOC106561728 other upstream 1098956 97695939 ~ 97711108 (+)
G209591 NA other upstream 1179643 97618617 ~ 97619089 (+)
G210484 NA other downstream 102919 98902788 ~ 98926406 (+)
G210823 LOC106561768 other downstream 437509 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 920310 99720179 ~ 99721983 (+)
LOC110502581 LOC106561777 other downstream 1005299 99777695 ~ 99818794 (+)

Expression


Co-expression Network