LOC110500657 (parp16)


Basic Information

Item Value
gene id LOC110500657
gene name parp16
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98854685 ~ 98868361 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960506.1
tctctttttacgCACGTACCGATTGCACGAGGAACGGTTTGAGGAAACGGATTTATTGCTGGCCAGAACCGAACAAACCACTTACTAGCAAGTACAGAATTTCTTTCTAAACCACTCCAATAAAAGTTGTTGGGAATGCAGCCACCACTCCCACCGGATGCAGTCAGAGAGCTGGTGTGTTCCTGTCTTCACAGGGACCCAGTAGCCGCTGATCTGAGATGCAGCCTGTTTGTGGCGGCTGCTCAGAACTACAAGCGGGACTCAGTTCTCAGACCCTATCCCCCCAGATacatcagagacagagacaccaaGGAGTTTGATGAGCTGCTGTCAGATGTCAGCAGTTTGCCTGGTGTGAGGGAGCTGGTGAGACTGAGACCTGGTGAAGCTGACCATCATCTGGCCCTCACACACTGGGTTCTCTCCTCCAAGAGCTTCGCTGTGAAAACACTACAGAAAGATGAGTATGCCAAGCTGTGTAACCTGACTGAGAGTGAGGGGATCTCCACGCCTGTGCCAGACTTCCTGTTTGAGCTGGAGTACTGCGACCAGATGAACGCTAAGTTTGAGAAGACACGGGCGGGACGCGACCTCTTCTACGCATTCCATGGCAGCCGACTGGAGAACTTCCATTCTATCATCCACAACGGACTACACTGCCACCTCAACAAGACGTCGTTGTTCGGAGAGGGCACCTACCTCACCAGTGACCTCAGCATGGCGGTCCTCTACAGTCCCCATGGCAACGGTTGGCGTGACAGTCTCCTGGGACCGTTGCTAAGCTGTGTCGCCGTGTGTGAGGTCATCGACCACCCAGACGTTAAGTGCCAGGTGAAGAGGAAAGACTCGGAGACCATTGACCGTCAGCGCTCCAGAGCCAGGaacagtgaaggaggagaggtCCCTCAGAAGTACTTTGTGGTCACCAACAATCAGCTGCTCCGAGTCAAATACCTGCTAGTGTACTCTCAGAGGAGACACCTGTCCAGGTTAGTACCTGCTAGTGGACTCTCAGAGAAGACACCTGTCCAGACATTCCCGGGGCAGGTCTTGGCTAGTCAGACATCACTTTGCCATTATGATGAGTCTCTATCTGCTGCTACTCATCTTCATCGGTGCCTTCAACTCCACCACATTCCTCTCCTTCTGGAACAGGCTTTTCCGGTGACGTCACAATCGCAAGACGGTCTCGTCCGGTGACCTCACAATCGGATGGACCACACACTATTCTGGTGACGTCACAATGAAATCACCGGACCTCACTAATCACAGGACATGGTCTTCCGTTGCTATCACACGAGTCTCTGGTGCTTTCCTACATGCAGCCCCGGTTGGTCCAGCCTGAGGCTCTCTATAGGCTTTATACCCCAGTGTTTCCTGGGCAAATTGTTTCTCTTTTCCATCCTTAGGGCTGACGTTAAAGGACTACGGGAAGAGCAGTGTGTCAAGTTTCAACATCTGAATATTCAAACCGTTTCTTATGAGAAGGAATAGGTCATATATACATGGACCATTCTTGTCATTCATAGTGCCTTCcataacagagagagacacagacagagagacaatcaGACAGATGGGCCAATGGGACATCCATATTATACACTATTTCCCTTTAAGCTCTTTCCTGTCTTCCACCTCTTTGTATGTacattatacatggttattaccgcgaggtcgaccgatttaatcggaatggccgatttcaagttttcataacaatcgtaaaTCGGTATTTTTGAACACCaattttgttttaattattattattttttttacacctttttatttaactaggca
>XM_036960505.1
TTAAATGTTGGATTTTGTTGTTGCAATGTTTAGCTTCTTTTTTTACGCAATTCGTGCTAATAATGGGTTTTGGTGCTTGGCGCCCAATTGACTCCCATTGAAGGAGAGAATGTCTTACCCAGAATCCACCGCGTGGCACATTAACAACGTACAGTGGGCGTTAATACGTGTCCAATGGAGTTTCCCATCTCCTTTAAAAGTATCTATGTGACGGCTAGTCACAACCTAGCTAGCTTGGCTACTTGTGTCTCAGTCAGTGTTGGGAATGCAGCCACCACTCCCACCGGATGCAGTCAGAGAGCTGGTGTGTTCCTGTCTTCACAGGGACCCAGTAGCCGCTGATCTGAGATGCAGCCTGTTTGTGGCGGCTGCTCAGAACTACAAGCGGGACTCAGTTCTCAGACCCTATCCCCCCAGATacatcagagacagagacaccaaGGAGTTTGATGAGCTGCTGTCAGATGTCAGCAGTTTGCCTGGTGTGAGGGAGCTGGTGAGACTGAGACCTGGTGAAGCTGACCATCATCTGGCCCTCACACACTGGGTTCTCTCCTCCAAGAGCTTCGCTGTGAAAACACTACAGAAAGATGAGTATGCCAAGCTGTGTAACCTGACTGAGAGTGAGGGGATCTCCACGCCTGTGCCAGACTTCCTGTTTGAGCTGGAGTACTGCGACCAGATGAACGCTAAGTTTGAGAAGACACGGGCGGGACGCGACCTCTTCTACGCATTCCATGGCAGCCGACTGGAGAACTTCCATTCTATCATCCACAACGGACTACACTGCCACCTCAACAAGACGTCGTTGTTCGGAGAGGGCACCTACCTCACCAGTGACCTCAGCATGGCGGTCCTCTACAGTCCCCATGGCAACGGTTGGCGTGACAGTCTCCTGGGACCGTTGCTAAGCTGTGTCGCCGTGTGTGAGGTCATCGACCACCCAGACGTTAAGTGCCAGGTGAAGAGGAAAGACTCGGAGACCATTGACCGTCAGCGCTCCAGAGCCAGGaacagtgaaggaggagaggtCCCTCAGAAGTACTTTGTGGTCACCAACAATCAGCTGCTCCGAGTCAAATACCTGCTAGTGTACTCTCAGAGGAGACACCTGTCCAGGTTAGTACCTGCTAGTGGACTCTCAGAGAAGACACCTGTCCAGACATTCCCGGGGCAGGTCTTGGCTAGTCAGACATCACTTTGCCATTATGATGAGTCTCTATCTGCTGCTACTCATCTTCATCGGTGCCTTCAACTCCACCACATTCCTCTCCTTCTGGAACAGGCTTTTCCGGTGACGTCACAATCGCAAGACGGTCTCGTCCGGTGACCTCACAATCGGATGGACCACACACTATTCTGGTGACGTCACAATGAAATCACCGGACCTCACTAATCACAGGACATGGTCTTCCGTTGCTATCACACGAGTCTCTGGTGCTTTCCTACATGCAGCCCCGGTTGGTCCAGCCTGAGGCTCTCTATAGGCTTTATACCCCAGTGTTTCCTGGGCAAATTGTTTCTCTTTTCCATCCTTAGGGCTGACGTTAAAGGACTACGGGAAGAGCAGTGTGTCAAGTTTCAACATCTGAATATTCAAACCGTTTCTTATGAGAAGGAATAGGTCATATATACATGGACCATTCTTGTCATTCATAGTGCCTTCcataacagagagagacacagacagagagacaatcaGACAGATGGGCCAATGGGACATCCATATTATACACTATTTCCCTTTAAGCTCTTTCCTGTCTTCCACCTCTTTGTATGTacattatacatggttattaccgcgaggtcgaccgatttaatcggaatggccgatttcaagttttcataacaatcgtaaaTCGGTATTTTTGAACACCaattttgttttaattattattattttttttacacctttttatttaactaggca
>XR_005039203.1
ACAGGCACATTTTGAATGGTTTCATACATGTTGGGAATGCAGCCACCACTCCCACCGGATGCAGTCAGAGAGCTGGTGTGTTCCTGTCTTCACAGGGACCCAGTAGCCGCTGATCTGAGATGCAGCCTGTTTGTGGCGGCTGCTCAGAACTACAAGCGGGACTCAGTTCTCAGACCCTATCCCCCCAGATacatcagagacagagacaccaaGGAGTTTGATGAGCTGCTGTCAGATGTCAGCAGTTTGCCTGGTGTGAGGGAGCTGGTGAGACTGAGACCTGGTGAAGCTGACCATCATCTGGCCCTCACACACTGGGTTCTCTCCTCCAAGAGCTTCGCTGTGAAAACACTACAGAAAGATGAGTATGCCAAGCTGTGTAACCTGACTGAGAGTGAGGGGATCTCCACGCCTGTGCCAGACTTCCTGTTTGAGCTGGAGTACTGCGACCAGATGAACGCTAAGTTTGAGAAGACACGGGCGGGACGCGACCTCTTCTACGCATTCCATGGCAGCCGACTGGAGAACTTCCATTCTATCATCCACAACGGACTACACTGCCACCTCAACAAGACGTCGTTGTTCGGAGAGGGCACCTACCTCACCAGTGACCTCAGCATGGCGGTCCTCTACAGTCCCCATGGCAACGGTTGGCGTGACAGTCTCCTGGGACCGTTGCTAAGCTGTGTCGCCGTGTGTGAGGTCATCGACCACCCAGACGTTAAGTGCCAGACTCGGAGACCATTGACCGTCAGCGCTCCAGAGCCAGGaacagtgaaggaggagaggtCCCTCAGAAGTACTTTGTGGTCACCAACAATCAGCTGCTCCGAGTCAAATACCTGCTAGTGTACTCTCAGAGGAGACACCTGTCCAGGTTAGTACCTGCTAGTGGACTCTCAGAGAAGACACCTGTCCAGACATTCCCGGGGCAGGTCTTGGCTAGTCAGACATCACTTTGCCATTATGATGAGTCTCTATCTGCTGCTACTCATCTTCATCGGTGCCTTCAACTCCACCACATTCCTCTCCTTCTGGAACAGGCTTTTCCGGT
>XM_021578146.2
ACAGGCACATTTTGAATGGTTTCATACATGTTGGGAATGCAGCCACCACTCCCACCGGATGCAGTCAGAGAGCTGGTGTGTTCCTGTCTTCACAGGGACCCAGTAGCCGCTGATCTGAGATGCAGCCTGTTTGTGGCGGCTGCTCAGAACTACAAGCGGGACTCAGTTCTCAGACCCTATCCCCCCAGATacatcagagacagagacaccaaGGAGTTTGATGAGCTGCTGTCAGATGTCAGCAGTTTGCCTGGTGTGAGGGAGCTGGTGAGACTGAGACCTGGTGAAGCTGACCATCATCTGGCCCTCACACACTGGGTTCTCTCCTCCAAGAGCTTCGCTGTGAAAACACTACAGAAAGATGAGTATGCCAAGCTGTGTAACCTGACTGAGAGTGAGGGGATCTCCACGCCTGTGCCAGACTTCCTGTTTGAGCTGGAGTACTGCGACCAGATGAACGCTAAGTTTGAGAAGACACGGGCGGGACGCGACCTCTTCTACGCATTCCATGGCAGCCGACTGGAGAACTTCCATTCTATCATCCACAACGGACTACACTGCCACCTCAACAAGACGTCGTTGTTCGGAGAGGGCACCTACCTCACCAGTGACCTCAGCATGGCGGTCCTCTACAGTCCCCATGGCAACGGTTGGCGTGACAGTCTCCTGGGACCGTTGCTAAGCTGTGTCGCCGTGTGTGAGGTCATCGACCACCCAGACGTTAAGTGCCAGGTGAAGAGGAAAGACTCGGAGACCATTGACCGTCAGCGCTCCAGAGCCAGGaacagtgaaggaggagaggtCCCTCAGAAGTACTTTGTGGTCACCAACAATCAGCTGCTCCGAGTCAAATACCTGCTAGTGTACTCTCAGAGGAGACACCTGTCCAGACATTCCCGGGGCAGGTCTTGGCTAGTCAGACATCACTTTGCCATTATGATGAGTCTCTATCTGCTGCTACTCATCTTCATCGGTGCCTTCAACTCCACCACATTCCTCTCCTTCTGGAACAGGCTTTTCCGGTGACGTCACAATCGCAAGACGGTCTCGTCCGGTGACCTCACAATCGGATGGACCACACACTATTCTGGTGACGTCACAATGAAATCACCGGACCTCACTAATCACAGGACATGGTCTTCCGTTGCTATCACACGAGTCTCTGGTGCTTTCCTACATGCAGCCCCGGTTGGTCCAGCCTGAGGCTCTCTATAGGCTTTATACCCCAGTGTTTCCTGGGCAAATTGTTTCTCTTTTCCATCCTTAGGGCTGACGTTAAAGGACTACGGGAAGAGCAGTGTGTCAAGTTTCAACATCTGAATATTCAAACCGTTTCTTATGAGAAGGAATAGGTCATATATACATGGACCATTCTTGTCATTCATAGTGCCTTCcataacagagagagacacagacagagagacaatcaGACAGATGGGCCAATGGGACATCCATATTATACACTATTTCCCTTTAAGCTCTTTCCTGTCTTCCACCTCTTTGTATGTacattatacatggttattaccgcgaggtcgaccgatttaatcggaatggccgatttcaagttttcataacaatcgtaaaTCGGTATTTTTGAACACCaattttgttttaattattattattttttttacacctttttatttaactaggca
>XM_021578170.2
ACAGGCACATTTTGAATGGTTTCATACATGTTGGGAATGCAGCCACCACTCCCACCGGATGCAGTCAGAGAGCTGGTGTGTTCCTGTCTTCACAGGGACCCAGTAGCCGCTGATCTGAGATGCAGCCTGTTTGTGGCGGCTGCTCAGAACTACAAGCGGGACTCAGTTCTCAGACCCTATCCCCCCAGATacatcagagacagagacaccaaGGAGTTTGATGAGCTGCTGTCAGATGTCAGCAGTTTGCCTGGTGTGAGGGAGCTGGTGAGACTGAGACCTGGTGAAGCTGACCATCATCTGGCCCTCACACACTGGGTTCTCTCCTCCAAGAGCTTCGCTGTGAAAACACTACAGAAAGATGAGTATGCCAAGCTGTGTAACCTGACTGAGAGTGAGGGGATCTCCACGCCTGTGCCAGACTTCCTGTTTGAGCTGGAGTACTGCGACCAGATGAACGCTAAGTTTGAGAAGACACGGGCGGGACGCGACCTCTTCTACGCATTCCATGGCAGCCGACTGGAGAACTTCCATTCTATCATCCACAACGGACTACACTGCCACCTCAACAAGACGTCGTTGTTCGGAGAGGGCACCTACCTCACCAGTGACCTCAGCATGGCGGTCCTCTACAGTCCCCATGGCAACGGTTGGCGTGACAGTCTCCTGGGACCGTTGCTAAGCTGTGTCGCCGTGTGTGAGGTCATCGACCACCCAGACGTTAAGTGCCAGACTCGGAGACCATTGACCGTCAGCGCTCCAGAGCCAGGaacagtgaaggaggagaggtCCCTCAGAAGTACTTTGTGGTCACCAACAATCAGCTGCTCCGAGTCAAATACCTGCTAGTGTACTCTCAGAGGAGACACCTGTCCAGACATTCCCGGGGCAGGTCTTGGCTAGTCAGACATCACTTTGCCATTATGATGAGTCTCTATCTGCTGCTACTCATCTTCATCGGTGCCTTCAACTCCACCACATTCCTCTCCTTCTGGAACAGGCTTTTCCGGTGACGTCACAATCGCAAGACGGTCTCGTCCGGTGACCTCACAATCGGATGGACCACACACTATTCTGGTGACGTCACAATGAAATCACCGGACCTCACTAATCACAGGACATGGTCTTCCGTTGCTATCACACGAGTCTCTGGTGCTTTCCTACATGCAGCCCCGGTTGGTCCAGCCTGAGGCTCTCTATAGGCTTTATACCCCAGTGTTTCCTGGGCAAATTGTTTCTCTTTTCCATCCTTAGGGCTGACGTTAAAGGACTACGGGAAGAGCAGTGTGTCAAGTTTCAACATCTGAATATTCAAACCGTTTCTTATGAGAAGGAATAGGTCATATATACATGGACCATTCTTGTCATTCATAGTGCCTTCcataacagagagagacacagacagagagacaatcaGACAGATGGGCCAATGGGACATCCATATTATACACTATTTCCCTTTAAGCTCTTTCCTGTCTTCCACCTCTTTGTATGTacattatacatggttattaccgcgaggtcgaccgatttaatcggaatggccgatttcaagttttcataacaatcgtaaaTCGGTATTTTTGAACACCaattttgttttaattattattattttttttacacctttttatttaactaggca
>XM_036960500.1
ACAGGCACATTTTGAATGGTTTCATACATGTTGGGAATGCAGCCACCACTCCCACCGGATGCAGTCAGAGAGCTGGTGTGTTCCTGTCTTCACAGGGACCCAGTAGCCGCTGATCTGAGATGCAGCCTGTTTGTGGCGGCTGCTCAGAACTACAAGCGGGACTCAGTTCTCAGACCCTATCCCCCCAGATacatcagagacagagacaccaaGGAGTTTGATGAGCTGCTGTCAGATGTCAGCAGTTTGCCTGGTGTGAGGGAGCTGGTGAGACTGAGACCTGGTGAAGCTGACCATCATCTGGCCCTCACACACTGGGTTCTCTCCTCCAAGAGCTTCGCTGTGAAAACACTACAGAAAGATGAGTATGCCAAGCTGTGTAACCTGACTGAGAGTGAGGGGATCTCCACGCCTGTGCCAGACTTCCTGTTTGAGCTGGAGTACTGCGACCAGATGAACGCTAAGTTTGAGAAGACACGGGCGGGACGCGACCTCTTCTACGCATTCCATGGCAGCCGACTGGAGAACTTCCATTCTATCATCCACAACGGACTACACTGCCACCTCAACAAGACGTCGTTGTTCGGAGAGGGCACCTACCTCACCAGTGACCTCAGCATGGCGGTCCTCTACAGTCCCCATGGCAACGGTTGGCGTGACAGTCTCCTGGGACCGTTGCTAAGCTGTGTCGCCGTGTGTGAGGTCATCGACCACCCAGACGTTAAGTGCCAGGTGAAGAGGAAAGACTCGGAGACCATTGACCGTCAGCGCTCCAGAGCCAGGaacagtgaaggaggagaggtCCCTCAGAAGTACTTTGTGGTCACCAACAATCAGCTGCTCCGAGTCAAATACCTGCTAGTGTACTCTCAGAGGAGACACCTGTCCAGGTTAGTACCTGCTAGTGGACTCTCAGAGAAGACACCTGTCCAGACATTCCCGGGGCAGGTCTTGGCTAGTCAGACATCACTTTGCCATTATGATGAGTCTCTATCTGCTGCTACTCATCTTCATCGGTGCCTTCAACTCCACCACATTCCTCTCCTTCTGGAACAGGCTTTTCCGGTGACGTCACAATCGCAAGACGGTCTCGTCCGGTGACCTCACAATCGGATGGACCACACACTATTCTGGTGACGTCACAATGAAATCACCGGACCTCACTAATCACAGGACATGGTCTTCCGTTGCTATCACACGAGTCTCTGGTGCTTTCCTACATGCAGCCCCGGTTGGTCCAGCCTGAGGCTCTCTATAGGCTTTATACCCCAGTGTTTCCTGGGCAAATTGTTTCTCTTTTCCATCCTTAGGGCTGACGTTAAAGGACTACGGGAAGAGCAGTGTGTCAAGTTTCAACATCTGAATATTCAAACCGTTTCTTATGAGAAGGAATAGGTCATATATACATGGACCATTCTTGTCATTCATAGTGCCTTCcataacagagagagacacagacagagagacaatcaGACAGATGGGCCAATGGGACATCCATATTATACACTATTTCCCTTTAAGCTCTTTCCTGTCTTCCACCTCTTTGTATGTacattatacatggttattaccgcgaggtcgaccgatttaatcggaatggccgatttcaagttttcataacaatcgtaaaTCGGTATTTTTGAACACCaattttgttttaattattattattttttttacacctttttatttaactaggcaa

Function

symbol description
parp16 Predicted to enable NAD+ ADP-ribosyltransferase activity; kinase binding activity; and protein serine/threonine kinase activator activity. Predicted to be involved in endoplasmic reticulum unfolded protein response and protein ADP-ribosylation. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum tubular network and nuclear envelope. Is expressed in several structures, including liver; median fin fold; presumptive ectoderm; vasculature; and ventral mesoderm. Orthologous to human PARP16 (poly(ADP-ribose) polymerase family member 16).

NR:

description
mono [ADP-ribose] polymerase PARP16-like isoform X1

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0003950 NAD+ ADP-ribosyltransferase activity molecular_function

KEGG:

id description
K00774 PARP16; poly [ADP-ribose] polymerase 16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960506.1 False 1800 mRNA 0.49 7 98854685 98868360
XM_036960505.1 False 1930 mRNA 0.49 7 98863833 98868360
XR_005039203.1 False 1054 mRNA 0.54 7 98864637 98867726
XM_021578146.2 False 1658 mRNA 0.49 7 98864637 98868360
XM_021578170.2 False 1645 mRNA 0.49 7 98864637 98868360
XM_036960500.1 True 1702 mRNA 0.49 7 98864637 98868361

Neighbor

gene id symbol gene type direction distance location
LOC118936885 NA coding upstream 54816 98798732 ~ 98799869 (+)
LOC110500756 pk coding upstream 221577 98613750 ~ 98633108 (+)
LOC110500731 LOC106561719 coding upstream 281921 98540412 ~ 98572764 (+)
gp137 gp137 coding upstream 400719 98437885 ~ 98453966 (+)
LOC118943874 tspan18 coding upstream 585242 98161662 ~ 98269443 (+)
LOC110510476 LOC106561728 coding downstream 30134 98897524 ~ 98944948 (+)
LOC118944192 NA coding downstream 39081 98907442 ~ 98907622 (+)
LOC118944193 NA coding downstream 61996 98930357 ~ 98930537 (+)
LOC118943887 NA coding downstream 81115 98949476 ~ 98950379 (+)
LOC118944187 NA coding downstream 84240 98859346 ~ 98986848 (+)
G210276 scamp5 non-coding upstream 12 98846805 ~ 98854673 (+)
G210472 NA non-coding upstream 19499 98834872 ~ 98835186 (+)
G210466 NA non-coding upstream 30224 98822259 ~ 98824461 (+)
G210465 NA non-coding upstream 32505 98820626 ~ 98822180 (+)
G210422 NA non-coding upstream 34829 98813477 ~ 98819856 (+)
G210310 NA non-coding downstream 4584 98872945 ~ 98873726 (+)
G210284 NA non-coding downstream 5979 98874340 ~ 98914132 (+)
G210480 NA non-coding downstream 9477 98877838 ~ 98941123 (+)
G210483 NA non-coding downstream 25081 98893442 ~ 98894115 (+)
G210303 NA non-coding downstream 41812 98910173 ~ 98958171 (+)
G210408 NA other upstream 154293 98697168 ~ 98700392 (+)
G209759 NA other upstream 896849 97957244 ~ 97958896 (+)
G209636 NA other upstream 1081920 97740061 ~ 97772765 (+)
LOC110500822 LOC106561728 other upstream 1154909 97695939 ~ 97711108 (+)
G209591 NA other upstream 1235596 97618617 ~ 97619089 (+)
G210484 NA other downstream 34427 98902788 ~ 98926406 (+)
G210823 LOC106561768 other downstream 369017 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 851818 99720179 ~ 99721983 (+)
LOC110502581 LOC106561777 other downstream 936807 99777695 ~ 99818794 (+)

Expression


Co-expression Network