XLOC_020744 (gpr35.1)


Basic Information

Item Value
gene id XLOC_020744
gene name gpr35.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 3252936 ~ 3261879 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040914
gtttgacttaaagaaacagtggcagggaaatgaacacGCCGTGCAGAGGAGGGTTAAATATACACACAATGTAACAATACACTAAATTTATGTCGATCAATATGAACTATTTAGCTGATCAATTCCTCAacaccgcatatctttggacttatgggggaaaccggagcacccagaggagacccacaccaacacgtgcagaacatgcaaactccacacagaaatgccaactggcccagccaggactcgaaccttgctgtgaggcgacagtgttaaccactgagccaccaaagTGTGTTTATATGTTGGGTGAATTTATCACTTTAATAGTAGCTGAAGTGGCTGACTGGACCCCACACGATGAAAACAGCTGCATGATATCAACATGTGTGACCACTCTGGAAAACACACTCATTTctcccagcacacacacacacacactgataaaaGCATTGTTCACGCAAATAATTCAGCTCACTCCTATCCTGAGAGAATTCCCGAGCGGAGCTGGCAGTCATCTGTTAACTAGAGCTGCTGAAGGTGTCAGATTTCTCCATACCAGGGCTGGGGAACATCCTGCATGTCTGCGCATGACGGCGCTTTATACTCTGCTAATAAAAGACTATTTGTCTTTGTACAGAAGACGTTATTGTGCATGAAAGTATACGGAGAGATTTCCTTCAGATTTGACCAGACCCGATGTCTTCCACTCGTGCATTTGAACAGGGCTTTGCGATGTCCAACTGCACGCTCAACCTCAACGACTCCATCCTGACCCTACAAAAAGTCACTTCCATTCCCATGTTCGTTCTAGGGATGCTGGGAAACATCTACGTGTTGGTGAAGTTCTGCTGGCGTCCCAAAACCCAATGGACCTACATGAACATCTACATCTCCAACATGGTTGCCGCCGACTGCGCCCTATTGATCTTCCTGCCTGTTAAGATCCATTACTACAACCGGGAGCTGGCGGGCGGTTTACAGAAGCTCTGCAATTTCGTTTTGTCGCTTTATTACATCAACATGTACGTCAGCATATTCACAATCACCGCCATAAGCGTTGTACGATACGTTGCTATTAAGTATCCAATGAAAGCCAGGGAAATATTCTCTTGTCGAAGCGCTCTGGTGGTTTGCGCCGTAATATGGGTTACCATTTGCTCCATCAGTCCGGTGTACTTCGTCACCGACTCAAGTAACGATAAGACCATGTGCTTCCAGAGGGTCAAGCAAACGTTGTCgctacatttcattttattgctaATTATCGTTGGATTCGTACTGCCATTTATAATCATGCTTTACTGCTCCGCAAGAGTCATTCACACTCTACGAAAACAACTGGACGTCGGATCACGTTCGGAAAAACTCCAATGCATGTTTATCATCATAGCTAATTTAATCGTGTTCATCGTATGCTTCTTTCCGGTTCATTTGGGTTACATCGTTAAATACATTGTACAAAAGGAGTATGCGGATCCGCTGGATAACTACAGCTGCGATTCGAAACTAATCGCGCACAATTTTCTGCACAGCGCCTTTTGCTTGTCGGATATGAACTGTGGTTTGGACTGCTTTAGCTACTTTTTTGCCACCAAAACATCATGGAACATGTGCTGCACAGGTCAAGCCAAAAACGAGAAGAGTAGATATAACACGGTTTCAGATTCTGATGGCAAGTCTTAACCctttgtgtactgttcaaattgactacactttcgttatgttgggggctgtttttgccccattgacctccactaacaatcaagaatgcatgatgaGTAAATGCTGCCATggctttacaataaaaaaaaaatgacgttataatggaagtcaatgagacaAAAACATGATGAAAGGGTAGTCGATTTTGTGTATTcttcaatatttttttccaaattatgcattaaaataagttttgttcaacacaatctcatggcaattcgtaactttttcatttagtggctaatttgtacgaattcgtacaatctaattcgtacattttagtacgatttgctcatcccccaatgacggttgggtttaggggtggggttaggtgccacgcctcctttttaaaattatacaatttcgtacgactgaacttgtacgaattagccactaaactggcaaaacgtaaaatacttacgttttctcgtgagatcaggctggttttgttACCAAAAATCACTCCATTTGCTGATACACAGAGAAAGTTGAGGCcagactaaagcctggtttatacttctgcgtcaagtgaccggagtgaggtgtaaatgttcctctgtgtcgagtttcttcgcttctgttttgcttttcctgaacacttcctggatgtacaagtgactcaaactcgctcatttcgaggcaggaaccggcggacgtgcaacaactttaactatgaggtaaacacaaaacaaaactttccatccggagctccttcacgggactccacacttgtaaacaatccctcgcgccattcgcgtggctctcggtcccgcccagactagtcagcgctaccaagctgaccaatcacatagcttgcgctatgcgttgttgcgacgtgtagttacattttttgagaggtacacgtcagcgacgccgacggccatggTGAAGtgctatgcgtcagcgctgtagcatacgccggcgtttgacgtagaagtataaatcagccttaagactcAAAGTCACCCCAGACTGGATGAAAACAACCCAACAGCACATAAGAGTTTATTGTTCTTGCTaactttaaaatgttcttttgtgAAAACTGTGCTCATAATAAACAGTTGCTATAATAAATGTTAAGTTTCTGCTCTTGACTGTTGAACTTTAGATATGTTGAGTTATGGTTTCCTTGaaggtttgtttaatattttgggATCCTGGTGGCTAGCCAACCTGTTGAGAGCTAGACATCATTTCCCAAAACACAGCTACGACCCTAAAGTGCATTTTCCATGGGAaagaggtgaaatttaaaaataactgtgtttgaATACAGCAAATGTACTTTATGTAACTCGAAAAGATAAAAGCACATCAATATTTAAACAACCCAGAGTTTATCAGACAGCGGTAGCTACTTCACAGTGACGATTATGATCAGATTTGGTTGTAAAGATTTGG
>TCONS_00040915
ACAGGCTTTGCGATGTCCAACTGCACGCTCAACCTCAACGACTCCATCCTGACCCTACAAAAAGTCACTTCCATTCCCATGTTCGTTCTAGGGATGCTGGGAAACATCTACGTGTTGGTGAAGTTCTGCTGGCGTCCCAAAACCCAATGGACCTACATGAACATCTACATCTCCAACATGGTTGCCGCCGACTGCGCCCTATTGATCTTCCTGCCTGTTAAGATCCATTACTACAACCGGGAGCTGGCGGGCGGTTTACAGAAGCTCTGCAATTTCGTTTTGTCGCTTTATTACATCAACATGTACGTCAGCATATTCACAATCACCGCCATAAGCGTTGTACGATACGTTGCTATTAAGTATCCAATGAAAGCCAGGGAAATATTCTCTTGTCGAAGCGCTCTGGTGGTTTGCGCCGTAATATGGGTTACCATTTGCTCCATCAGTCCGGTGTACTTCGTCACCGACTCAAGTAACGATAAGACCATGTGCTTCCAGAGGGTCAAGCAAACGTTGTCgctacatttcattttattgctaATTATCGTTGGATTCGTACTGCCATTTATAATCATGCTTTACTGCTCCGCAAGAGTCATTCACACTCTACGAAAACAACTGGACGTCGGATCACGTTCGGAAAAACTCCAATGCATGTTTATCATCATAGCTAATTTAATCGTGTTCATCGTATGCTTCTTTCCGGTTCATTTGGGTTACATCGTTAAATACATTGTACAAAAGGAGTATGCGGATCCGCTGGATAACTACAGCTGCGATTCGAAACTAATCGCGCACAATTTTCTGCACAGCGCCTTTTGCTTGTCGGATATGAACTGTGGTTTGGACTGCTTTAGCTACTTTTTTGCCACCAAAACATCATGGAACATGTGCTGCACAGGTCAAGCCAAAAACGAGAAGAGTAGATATAACACGGTTTCAGATTCTGATGGCAAGTCTTAACCctttgtgtactgttcaaattgactacactttcgttatgttgggggctgtttttgccccattgacctccactaacaatcaagaatgcatgatgaGTAAATGCTGCCATggctttacaa

Function

symbol description
gpr35.1 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in positive regulation of Rho protein signal transduction and positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GPR35 (G protein-coupled receptor 35).

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0035025 positive regulation of Rho protein signal transduction biological_process
GO:0051482 positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-080204-17 Predicted to enable G protein-coupled receptor activity. Predicted to be involved in positive regulation of Rho protein signal transduction and positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G protein-coupled signaling pathway. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human GPR35 (G protein-coupled receptor 35).

Ensembl:

ensembl_id ENSDARG00000074633

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040914 False 3126 mRNA 0.43 2 3252936 3261879
TCONS_00040915 True 1082 mRNA 0.44 1 3254260 3255341

Neighbor

gene id symbol gene type direction distance location
XLOC_020743 lonp1 coding downstream 69971 3160447 ~ 3182965 (-)
XLOC_020742 lmnb2 coding downstream 100579 3121086 ~ 3152357 (-)
XLOC_020741 ing5a coding downstream 160800 2949111 ~ 3092136 (-)
XLOC_020740 pigx coding downstream 315407 2931340 ~ 2937529 (-)
XLOC_020739 pak2b coding downstream 323780 2895511 ~ 2929156 (-)
XLOC_020745 si:zfos-943e10.1 coding upstream 534 3262413 ~ 3299355 (-)
XLOC_020746 tbxa2r coding upstream 74844 3336723 ~ 3344613 (-)
XLOC_020747 NA coding upstream 85634 3347513 ~ 3347884 (-)
XLOC_020748 ptprsa coding upstream 127468 3389347 ~ 3680725 (-)
XLOC_020749 NA coding upstream 478707 3740586 ~ 3741284 (-)
XLOC_020738 NA non-coding downstream 360390 2889663 ~ 2892546 (-)
XLOC_020736 NA non-coding downstream 424850 2814463 ~ 2828086 (-)
XLOC_020734 NA non-coding downstream 427235 2795028 ~ 2825701 (-)
XLOC_020735 NA non-coding downstream 445909 2799465 ~ 2807027 (-)
XLOC_020733 NA non-coding downstream 463398 2769742 ~ 2789538 (-)
XLOC_020750 NA non-coding upstream 621728 3883607 ~ 3886684 (-)
XLOC_020752 CU074310.1 non-coding upstream 1049924 4311803 ~ 4313118 (-)
XLOC_020756 NA non-coding upstream 1471128 4733007 ~ 4735337 (-)

Expression


Co-expression Network