LOC118944193


Basic Information

Item Value
gene id LOC118944193
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 98930357 ~ 98930537 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118944193
attatttttccaaaaaaaaaaaaaaaaatctgttcttatcagtttaatatctgatacgtcccctaTCTGGGGACcatatattaaattgatttttgGAATAGGGAGATGGAataggggcttgctccgtccactccacgcatcgacctggtattgcagtacctccaggAACGGTGCACCCCCT

Function

NR:

description
LOC569167 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118944193 True 181 mRNA 0.41 1 98930357 98930537

Neighbor

gene id symbol gene type direction distance location
LOC118944192 NA coding upstream 22735 98907442 ~ 98907622 (+)
LOC110500657 parp16 coding upstream 61996 98854685 ~ 98868361 (+)
LOC118936885 NA coding upstream 130488 98798732 ~ 98799869 (+)
LOC110500756 pk coding upstream 297249 98613750 ~ 98633108 (+)
LOC110500731 LOC106561719 coding upstream 357593 98540412 ~ 98572764 (+)
LOC118943887 NA coding downstream 18939 98949476 ~ 98950379 (+)
LOC118944187 NA coding downstream 22064 98859346 ~ 98986848 (+)
atp8b4 atp8b4 coding downstream 159137 99089674 ~ 99152115 (+)
cops2 cops2 coding downstream 235826 99166363 ~ 99180897 (+)
LOC110502545 cep152 coding downstream 258364 99188901 ~ 99207160 (+)
G210284 NA non-coding upstream 16225 98874340 ~ 98914132 (+)
G210483 NA non-coding upstream 36242 98893442 ~ 98894115 (+)
G210310 NA non-coding upstream 56631 98872945 ~ 98873726 (+)
G210276 scamp5 non-coding upstream 75684 98846805 ~ 98854673 (+)
G210472 NA non-coding upstream 95171 98834872 ~ 98835186 (+)
G210492 NA non-coding downstream 49291 98979828 ~ 98980286 (+)
G210508 NA non-coding downstream 84515 99015052 ~ 99015276 (+)
G210308 NA non-coding downstream 91520 99022057 ~ 99022698 (+)
G210288 NA non-coding downstream 94461 99024998 ~ 99025499 (+)
G210776 NA non-coding downstream 163071 99093608 ~ 99093905 (+)
G210484 NA other upstream 3951 98902788 ~ 98926406 (+)
LOC110510476 LOC106561728 other upstream 30819 98897524 ~ 98944948 (+)
G210408 NA other upstream 229965 98697168 ~ 98700392 (+)
G209759 NA other upstream 972521 97957244 ~ 97958896 (+)
G209636 NA other upstream 1157592 97740061 ~ 97772765 (+)
G210823 LOC106561768 other downstream 306841 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 789642 99720179 ~ 99721983 (+)
LOC110502581 LOC106561777 other downstream 874631 99777695 ~ 99818794 (+)
LOC110500919 LOC106584740 other downstream 966082 99896619 ~ 99899881 (+)
G211779 NA other downstream 1529120 100459657 ~ 100461981 (+)

Expression


Co-expression Network