galk2 (galk2)


Basic Information

Item Value
gene id galk2
gene name galk2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99154259 ~ 99166352 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039228.1
CCTTGCTGCGCAGCGTGAACATGAGAGGGAATCGTGATTCCTTTGAACTGGTCCCTTTTCCTACTCTTCCGTATTGTTTCGTTTTGTTACAATGAATGTGTTTGCAGCTGATCTAGAAACAGTTACTTTGTTTAACAGAAAGCGTTTGAGGTAGCGATTTTTGGTGGGTAGAGCTGGTCGTAGATCAGCTTTTCAATAATATCCGGGACTCTCGTGTGACAGTCAGCTGATATAGTATTAGGTGtgtttctatatattttttcccctcagTACAGTACTCCAGATAGATCTAGTTGCAATTAGATTTGGTGATTTAACAATAGTCTAAAACCAACCGGTAAGAACTGGTATTTGGTTTGAAAAAATGGCAGCACACCCGCCAAAGACAAAGATTCTGATAAGTGCAAATAAAAGGTTGCAAAACCTGAAAGAGGCCTTCGAGAAAAAGTATGGAGAAGCACCTCTTTTTTACGCACAAGCTCCTGGAAGAGTCAATCTAATAGGAGAACACATTGACTACTGTGGTTATGCTGTGCTCCCAATGGCTATTGAGCAGAGTATTCTTGCTGCGGTCACTGTCAATGATTCCAAGAAAATCAACCTGGCCAACACAGAACCTAAATACAAggacTTTACAGTCTCTTCAGAAGATATGGAGATAGACAAGGACAATCCTCAGTGGTACTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGgagCACCTAGGGAAGGTTCCTCTGTCTGGGATGAAGTGTGTTGTGGACGGGACCATCCCGGCTAGCTCAGGCCTGTCCAGCTCCAGTGCCCTGGTCTGCTGTGCTGCGCTCCTCACTATGGAGGTTAACCACAAGTCCCTCAACAAGGTGGCGCTGGCAGAGATTTCAGCCAAGTGTGAGCGCTACATTGGCACTGAGGGTGGGGGCATGGACCAGTCCATCTCATTCCTGGCAGAGGAAGGAACTGCCAAGCTGATCGAGTTCCAACCTCTGCGGGCGTCTGACGTACGTCTCCCTGAGGGAGCAGTGTTCGTTATCTCTAACTGCTGCGTTGAGATGAACAAGGCTGCTACCTCTCACTTCAACATCCGGGTGGTCGAGTGTCGGATAGCCACCAAGATGTTGGCGAAGGCTCGGGGGCTGGAGTGGGGCCGGCTGCTGAAACTGTCCCAGGTGCAGACAGAGCTGGAGGCCTCTCTGGAGGAGATGCTGCGGCTGGTGGCTGAGGTGCTGCACCCTGAGCCCTACAGCAGAGAGGAGGTCTGCAAGGCCCTGGGAATCACCACAGAACAGCTCTGTACAGACCTCCTTAGCCCCAACACACAGCACGtGGCCCAGTTCAAGCTGTACCAGCGGGCCAGGCATGTATACGGCGAGGCGGCACGGGTCCTGCGGTTCAAGAGCGTGTGTGATGAAGCTCCCACCGCCCCGAACGCCGTGCAGCGTCTAGGAGACCTGATGAAGCAGAGCCATGCCAGCTGCAGAGACCTGTACGAGTGCAGCTGTCCAGAACTGGACCAGCTGGTAGAGATATGTCTGCAGTCTGGTGCGGTGGGATCCCGGCTGACCGGAGCAGGCTGGGGGGGCTGTGCTGTCTCCATGGTCCCCACTGACAAGGTGGAGTCTTTCCTAAAGAGCGTCAGAGAGTTGTACTACACGGCAGACCCACGCAGAGCCGAGCTAGAGAAACACAGTCTGTTTGTCACCAAGCCTGGTGGAGGGGCGGCCATTTTCCTTGAagactgaaataaaaaaaatgcttcTCTTTACAATTTTGAGGTGAAATGTCTTCCTTGCCGTTTCACCTTTTCAGTATTTTTATACTATTATTTTAGTCGTGACTCTATGACTAATTCTCATGCCAAAATGACACAGTTGATGATTCTGGAATTTCAAGGGCAATGATAATCAAAGCTAGTCTGCTCCCAGatttgttgtctccttctatagcctgatcccagatttgttgtctccttctatagcctgatTCTAGATCTGTTTGTCCTCTTGCCAACTTCATTGCTTAATTTTCAAGCCAAACATGACAAGAAGTTGGCATGACAGCACAAAAAGACTGGCACTATTTCATAGGGGGAAAAATGTAGACATTTTATAATTTGGAACTCAAGTTATAACTAGTTTTAAAACTAATGATTCAAGATCAACTTCTTTACAAGAAAGGGGACTTTTCTTTTATTCTGTGAGTGTAATGATTTCAGTTGAAACGGGACAGCGCTATCTATATAAAGTACAATACTTTTCCACACAGTGCAGTACTACATTCCTTCcattgctgtgtgtgtttgtgttgtatgttttGAAGGAATTAAGAAGTAAAAAGGCTTTTGTTTA
>XM_036960690.1
GAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGTTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGTTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGTTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGGTGAGTCATGTAGACTCTGCTTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGgagCACCTAGGGAAGGTTCCTCTGTCTGGGATGAAGTGTGTTGTGGACGGGACCATCCCGGCTAGCTCAGGCCTGTCCAGCTCCAGTGCCCTGGTCTGCTGTGCTGCGCTCCTCACTATGGAGGTTAACCACAAGTCCCTCAACAAGGTGGCGCTGGCAGAGATTTCAGCCAAGTGTGAGCGCTACATTGGCACTGAGGGTGGGGGCATGGACCAGTCCATCTCATTCCTGGCAGAGGAAGGAACTGCCAAGCTGATCGAGTTCCAACCTCTGCGGGCGTCTGACGTACGTCTCCCTGAGGGAGCAGTGTTCGTTATCTCTAACTGCTGCGTTGAGATGAACAAGGCTGCTACCTCTCACTTCAACATCCGGGTGGTCGAGTGTCGGATAGCCACCAAGATGTTGGCGAAGGCTCGGGGGCTGGAGTGGGGCCGGCTGCTGAAACTGTCCCAGGTGCAGACAGAGCTGGAGGCCTCTCTGGAGGAGATGCTGCGGCTGGTGGCTGAGGTGCTGCACCCTGAGCCCTACAGCAGAGAGGAGGTCTGCAAGGCCCTGGGAATCACCACAGAACAGCTCTGTACAGACCTCCTTAGCCCCAACACACAGCACGtGGCCCAGTTCAAGCTGTACCAGCGGGCCAGGCATGTATACGGCGAGGCGGCACGGGTCCTGCGGTTCAAGAGCGTGTGTGATGAAGCTCCCACCGCCCCGAACGCCGTGCAGCGTCTAGGAGACCTGATGAAGCAGAGCCATGCCAGCTGCAGAGACCTGTACGAGTGCAGCTGTCCAGAACTGGACCAGCTGGTAGAGATATGTCTGCAGTCTGGTGCGGTGGGATCCCGGCTGACCGGAGCAGGCTGGGGGGGCTGTGCTGTCTCCATGGTCCCCACTGACAAGGTGGAGTCTTTCCTAAAGAGCGTCAGAGAGTTGTACTACACGGCAGACCCACGCAGAGCCGAGCTAGAGAAACACAGTCTGTTTGTCACCAAGCCTGGTGGAGGGGCGGCCATTTTCCTTGAagactgaaataaaaaaaatgcttcTCTTTACAATTTTGAGGTGAAATGTCTTCCTTGCCGTTTCACCTTTTCAGTATTTTTATACTATTATTTTAGTCGTGACTCTATGACTAATTCTCATGCCAAAATGACACAGTTGATGATTCTGGAATTTCAAGGGCAATGATAATCAAAGCTAGTCTGCTCCCAGATTTGTTGTCTccttctgtagcctggtcccagatttgttgtctccttctatagcctgatcccagatttgttgtctccttctatagcctgatTCTAGATCTGTTTGTCCTCTTGCCAACTTCATTGCTTAATTTTCAAGCCAAACATGACAAGAAGTTGGCATGACAGCACAAAAAGACTGGCACTATTTCATAGGGGGAAAAATGTAGACATTTTATAATTTGGAACTCAAGTTATAACTAGTTTTAAAACTAATGATTCAAGATCAACTTCTTTACAAGAAAGGGGACTTTTCTTTTATTCTGTGAGTGTAATGATTTCAGTTGAAACGGGACAGCGCTATCTATATAAAGTACAATACTTTTCCACACAGTGCAGTACTACATTCCTTCcattgctgtgtgtgtttgtgttgtatgttttGAAGGAATTAAGAAGTAAAAAGGCTTTTGTTT
>XM_036960677.1
GCCTTGCTGCGCAGCGTGAACATGAGAGGGAATCGTGATTCCTTTGAACTGGTCCCTTTTCCTACTCTTCCGTATTGTTTCGTTTTGTTACAATGAATGTGTTTGCAGCTGATCTAGAAACAGTTACTTTGTTTAACAGAAAGCGTTTGAGGTAGCGATTTTTGGTGGGTAGAGCTGGTCGTAGATCAGCTTTTCAATAATATCCGGGACTCTCGTGTGACAGTCAGCTGATATAGTATTAGGTGtgtttctatatattttttcccctcagTACAGTACTCCAGATAGATCTAGTTGCAATTAGATTTGGTGATTTAACAATAGTCTAAAACCAACCGGTAAGAACTGGTATTTGGTTTGAAAAAATGGCAGCACACCCGCCAAAGACAAAGATTCTGATAAGTGCAAATAAAAGGTTGCAAAACCTGAAAGAGGCCTTCGAGAAAAAGTATGGAGAAGCACCTCTTTTTTACGCACAAGCTCCTGGAAGAGTCAATCTAATAGGAGAACACATTGACTACTGTGGTTATGCTGTGCTCCCAATGGCTATTGAGCAGAGTATTCTTGCTGCGGTCACTGTCAATGATTCCAAGAAAATCAACCTGGCCAACACAGAACCTAAATACAAggacTTTACAGTCTCTTCAGAAGATATGGAGATAGACAAGGACAATCCTCAGTGGTACTATTACTTTCTCTGTGGGGTGAAAGGGATTCAGgagCACCTAGGGAAGGTTCCTCTGTCTGGGATGAAGTGTGTTGTGGACGGGACCATCCCGGCTAGCTCAGGCCTGTCCAGCTCCAGTGCCCTGGTCTGCTGTGCTGCGCTCCTCACTATGGAGGTTAACCACAAGTCCCTCAACAAGGTGGCGCTGGCAGAGATTTCAGCCAAGTGTGAGCGCTACATTGGCACTGAGGGTGGGGGCATGGACCAGTCCATCTCATTCCTGGCAGAGGAAGGAACTGCCAAGCTGATCGAGTTCCAACCTCTGCGGGCGTCTGACGTACGTCTCCCTGAGGGAGCAGTGTTCGTTATCTCTAACTGCTGCGTTGAGATGAACAAGGCTGCTACCTCTCACTTCAACATCCGGGTGGTCGAGTGTCGGATAGCCACCAAGATGTTGGCGAAGGCTCGGGGGCTGGAGTGGGGCCGGCTGCTGAAACTGTCCCAGGTGCAGACAGAGCTGGAGGCCTCTCTGGAGGAGATGCTGCGGCTGGTGGCTGAGGTGCTGCACCCTGAGCCCTACAGCAGAGAGGAGGTCTGCAAGGCCCTGGGAATCACCACAGAACAGCTCTGTACAGACCTCCTTAGCCCCAACACACAGCACGtGGCCCAGTTCAAGCTGTACCAGCGGGCCAGGCATGTATACGGCGAGGCGGCACGGGTCCTGCGGTTCAAGAGCGTGTGTGATGAAGCTCCCACCGCCCCGAACGCCGTGCAGCGTCTAGGAGACCTGATGAAGCAGAGCCATGCCAGCTGCAGAGACCTGTACGAGTGCAGCTGTCCAGAACTGGACCAGCTGGTAGAGATATGTCTGCAGTCTGGTGCGGTGGGATCCCGGCTGACCGGAGCAGGCTGGGGGGGCTGTGCTGTCTCCATGGTCCCCACTGACAAGGTGGAGTCTTTCCTAAAGAGCGTCAGAGAGTTGTACTACACGGCAGACCCACGCAGAGCCGAGCTAGAGAAACACAGTCTGTTTGTCACCAAGCCTGGTGGAGGGGCGGCCATTTTCCTTGAagactgaaataaaaaaaatgcttcTCTTTACAATTTTGAGGTGAAATGTCTTCCTTGCCGTTTCACCTTTTCAGTATTTTTATACTATTATTTTAGTCGTGACTCTATGACTAATTCTCATGCCAAAATGACACAGTTGATGATTCTGGAATTTCAAGGGCAATGATAATCAAAGCTAGTCTGCTCCCAGATTTGTTGTCTccttctgtagcctggtcccagatttgttgtctccttctatagcctgatcccagatttgttgtctccttctatagcctgatTCTAGATCTGTTTGTCCTCTTGCCAACTTCATTGCTTAATTTTCAAGCCAAACATGACAAGAAGTTGGCATGACAGCACAAAAAGACTGGCACTATTTCATAGGGGGAAAAATGTAGACATTTTATAATTTGGAACTCAAGTTATAACTAGTTTTAAAACTAATGATTCAAGATCAACTTCTTTACAAGAAAGGGGACTTTTCTTTTATTCTGTGAGTGTAATGATTTCAGTTGAAACGGGACAGCGCTATCTATATAAAGTACAATACTTTTCCACACAGTGCAGTACTACATTCCTTCcattgctgtgtgtgtttgtgttgtatgttttGAAGGAATTAAGAAGTAAAAAGGCTTTTGTTT

Function

symbol description
galk2 Predicted to enable galactokinase activity. Predicted to be involved in galactose metabolic process. Predicted to act upstream of or within carbohydrate phosphorylation. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Orthologous to human GALK2 (galactokinase 2).

NR:

description
N-acetylgalactosamine kinase

GO:

id name namespace
GO:0046835 carbohydrate phosphorylation biological_process
GO:0006012 galactose metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004335 galactokinase activity molecular_function

KEGG:

id description
K18674 GALK2; N-acetylgalactosamine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039228.1 False 2350 mRNA 0.47 11 99154259 99166351
XM_036960690.1 False 2201 mRNA 0.49 7 99154260 99165018
XM_036960677.1 True 2382 mRNA 0.48 10 99154260 99166352

Neighbor

gene id symbol gene type direction distance location
LOC110500795 LOC106561757 coding downstream 140882 98997411 ~ 99013377 (-)
ctdspl2a LOC106561755 coding downstream 158085 98974844 ~ 98996174 (-)
LOC110500849 LOC106561754 coding downstream 186961 98959028 ~ 98967298 (-)
LOC118944229 NA coding downstream 200020 98954131 ~ 98954239 (-)
LOC118944200 NA coding downstream 204138 98949908 ~ 98950121 (-)
tjp1b tjp1 coding upstream 55498 99221850 ~ 99503455 (-)
duox LOC106584698 coding upstream 377437 99543789 ~ 99582886 (-)
LOC110500900 LOC106561773 coding upstream 434433 99600785 ~ 99615331 (-)
LOC118936886 NA coding upstream 449480 99615676 ~ 99619142 (-)
LOC110502568 LOC106561766 coding upstream 530867 99697219 ~ 99725327 (-)
G211141 NA non-coding downstream 337 99153561 ~ 99153922 (-)
G211142 NA non-coding downstream 2168 99151807 ~ 99152091 (-)
G211137 NA non-coding downstream 9255 99144685 ~ 99145004 (-)
G211136 NA non-coding downstream 9822 99144122 ~ 99144437 (-)
G211132 NA non-coding downstream 18253 99135719 ~ 99136006 (-)
G211143 LOC105018362 non-coding upstream 12381 99178733 ~ 99179737 (-)
G211126 NA non-coding upstream 13907 99180259 ~ 99181029 (-)
G211148 NA non-coding upstream 15332 99181684 ~ 99181992 (-)
G211150 NA non-coding upstream 21077 99187429 ~ 99187801 (-)
G211175 NA non-coding upstream 54787 99221139 ~ 99221628 (-)
G211127 NA other downstream 30601 99123233 ~ 99123658 (-)
G210765 NA other downstream 128141 99025732 ~ 99026118 (-)
LOC118943885 LOC106561728 other downstream 208190 98914015 ~ 98946069 (-)
LOC118943882 LOC106561728 other downstream 210462 98936783 ~ 98944041 (-)
LOC118936884 NA other downstream 1008742 98127948 ~ 98145517 (-)
G211402 NA other upstream 689961 99856313 ~ 99857855 (-)
G211447 myo5c other upstream 793205 99959557 ~ 99963474 (-)
G211630 LOC106584747 other upstream 906895 100073247 ~ 100073797 (-)

Expression


Co-expression Network