LOC110500866 (cep152)


Basic Information

Item Value
gene id LOC110500866
gene name cep152
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99207967 ~ 99210940 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036934808.1
ACCTCATCAAGCACaaatcgctcagcactaataTTGGATGTAATTCTAGTCAGATGTATAGTCACTAGTTACCAAATTTAAAAGTTGAGCAAGTTAGATTTTCCCATTAAATTTACCCACATGTATTTTATAAGTAAATAGTTTATGATCCTTGAATGCCATAATTTACTTATTTTGTTAGATACTTCTCCCTATTAGCTGAAATCGTCGTGCTAGCTGTTCGATGCAAATTTGTCACCTCTCAACTGCCGTAGGGAGTCTACTCCTAAAGTTTTGTGCCAATTTTCTTCATTTTAGGCTCCAAAAAAGTGATACTGTCCATTTTATATTCAGCTGTGTTTTGTATAGGCTATCAATACGTTATCACGTCATGCTAGACGGGCGTTCAATAATGGGCGATAGCCAGCTAAAATCAGACCGTGTTGATGTTGCTCCTGTAAAAGTCCTTATTTTCCCCTAATACTAGTCGACCACTCTGGACTTGTCTGGGCAGACCTGCCTCTCCTCTACAAAAAATCAACGTGAGAAACTTGCTAGCAAATGTTTGTGCTATTGACACTAAATAAATACTGCATTCtgaccccctctccccctctttattAGATTCATGATAGTGTTCTTAGACAAAGCAAGGAAAGAAAGTGTGATTCTCAGCCGTTGTTGGTAATGAATCGTCTTAGCTTTTGAAATGGACTTACTCGTCGGTTACGTTTCTAAAATGAATGTTCACCACAGACGATCAGATATGGAGCAGCGTTTCCACGCTGGCCTTGAACAGATGAAGGAGCAGTACATGAAGGCTGTTGAAAAAATCAGAGGTGACATGCTACGGTACCTTCAGCAGAGTAAAGAGCGAGCAGCGGAGATGATCCGTGTCGAggtgctgagagagaggcaggacacAGCCAGGAAGATGCGACGCTACCATCTCACCTGTCTACAGGAAGTTGAAGAGGACGGGAGGCAGGCCACAGGGGCTGAGAAGAAAATCATTAACGTTGCAAGTAAGCTGGCAGCCATGGCCAAAGAGTTGGAGACCCCTACCAAGAGGACGAGGGGAAAGAGCCACAGCTTACCGGGCTCGTCGTTAAAGACCGAGGCAGCTACTGACAGCCATCCAGGAAATGCTTCAGGCTCTCCCTTTATAAAAACCCAATGTCCAGCTAGTCACCTCCCTGAGACCACCAGGTCCGGTCGTGGTGAGGGGAGAACCCTGAAGACCAAGATGAACTCTGACCGTGACTCCAAAACCTCCTCAGCTGCAGTCAAGACCACCAGGACTACTAGGCCCATGAGTAAACCCACCCACCAGGAACCCCTGACCAATGGCAAAGAGAAAGGAGCCCCTGCAGACACGGCAGGGAAACCCCATATATCTTCAGGACTCTTCCTCTCACTTCCTCCTCACAAACCCTCTCATCAGATTGGTCAAACCTTCCTTGACTGTTACCATGGTGAATTTACTAACGTTACTCTAAGGACCCAGACCAGCAGGGAGCTGTACCTGCAGGTGGCGGAGTCTGAGAGATCAGACGATGACAACTTCCCGTGTCACCGTAGTAACACTAAAACCTCCCTGGTTCAGGAGTTTCCCGTTAGAGACGGAGGAGGATTGCGCGATTGGAATACGTCCAGTAATGAGTCCCAAGATGGCCGCCACATCCTCGCAGTTAACTCTTACCCAGACAGAAAAATAGAAAGTGAAACCGTTCCCTCTTTGTGGACCTTCTTCGACCGATGACCTGGGCGATTTTAAGGTAGCCAACTCAGACATGACAGTTTATAAAGAGATCGTCAACGTCAATATTCCGTCCCACGCCGCCGAGGCCTTGAATTTCCCGTGTCCCGCCTCAGACCAAAGCTTTGACTCAGTCAGTCCccagtatttgttttatttttt

Function

symbol description
cep152 Predicted to be involved in centriole replication. Predicted to act upstream of or within de novo centriole assembly involved in multi-ciliated epithelial cell differentiation. Predicted to be located in deuterosome and microtubule organizing center. Predicted to be active in centrosome. Human ortholog(s) of this gene implicated in Seckel syndrome 5 and primary autosomal recessive microcephaly 9. Orthologous to human CEP152 (centrosomal protein 152).

NR:

description
PREDICTED: centrosomal protein of 152 kDa

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036934808.1 True 1900 mRNA 0.46 4 99207967 99210940

Neighbor

gene id symbol gene type direction distance location
LOC110502545 cep152 coding upstream 807 99188901 ~ 99207160 (+)
cops2 cops2 coding upstream 27070 99166363 ~ 99180897 (+)
atp8b4 atp8b4 coding upstream 55852 99089674 ~ 99152115 (+)
LOC118944187 NA coding upstream 255176 98859346 ~ 98986848 (+)
LOC118943887 NA coding upstream 257588 98949476 ~ 98950379 (+)
duox2 LOC106561732 coding downstream 372071 99581865 ~ 99597608 (+)
LOC110502564 LOC106584732 coding downstream 425796 99636736 ~ 99678499 (+)
LOC110502581 LOC106561777 coding downstream 566755 99777695 ~ 99818794 (+)
LOC110502588 LOC106584738 coding downstream 624678 99835618 ~ 99877214 (+)
LOC118943910 NA coding downstream 673214 99884154 ~ 99891769 (+)
G210801 NA non-coding upstream 22262 99185356 ~ 99185705 (+)
G210800 NA non-coding upstream 22837 99184901 ~ 99185130 (+)
G210768 NA non-coding upstream 24239 99182752 ~ 99183728 (+)
G210772 NA non-coding upstream 54058 99153369 ~ 99153909 (+)
G210814 NA non-coding downstream 10946 99221886 ~ 99223987 (+)
G210820 NA non-coding downstream 23185 99234125 ~ 99287244 (+)
G210828 LOC105906243 non-coding downstream 37186 99248126 ~ 99252393 (+)
G210840 NA non-coding downstream 76796 99287736 ~ 99288047 (+)
G210841 NA non-coding downstream 80134 99291074 ~ 99291385 (+)
G210484 NA other upstream 281561 98902788 ~ 98926406 (+)
LOC110510476 LOC106561728 other upstream 308429 98897524 ~ 98944948 (+)
G210408 NA other upstream 507575 98697168 ~ 98700392 (+)
G209759 NA other upstream 1250131 97957244 ~ 97958896 (+)
G209636 NA other upstream 1435202 97740061 ~ 97772765 (+)
G210823 LOC106561768 other downstream 26438 99237378 ~ 99238258 (+)
G210983 LOC106561766 other downstream 509239 99720179 ~ 99721983 (+)
LOC110500919 LOC106584740 other downstream 685679 99896619 ~ 99899881 (+)
G211779 NA other downstream 1248717 100459657 ~ 100461981 (+)

Expression


Co-expression Network