LOC110502564 (LOC106584732)


Basic Information

Item Value
gene id LOC110502564
gene name LOC106584732
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 99636736 ~ 99678499 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036960784.1
CGGGAggcaaggaagaggagaaagagaggaagctGCGATAAACATTGTCACAGAGTGAGTCTAAAGTAGGACAATAAAGGGGATCACGGTATCAATGCTCGAACAATGGACTTAGCAGATATGTTCATCGTCAAATTCCTCTATTTCATCTACTTAATAAATTACACCCAAGGTTACCATTATGGGAACCCCCTGAACAAGTATGTTCATCACTATGAGGGTCTCTCCTATAACACCTATGAGATACATGAAAAGCACCTGAGAGCCAAGAGGGCCCTCCACCACCAAGACGCGTTTCTCCATCTAGACTTCCATGCACACGGAAGACACTTCAACCTGAGGATGAAGAGAGACACCAGTCTGTTTGCGGAGGACCTGAAGGTGTCTGTAGGAGGCCAGGAGGTGAACTATGACACCTCTCACATTTACACAGGAGAAATATATGGTGAAAAGGGCACACTGAGCCATGGTTCGGTGGTGGAGGGCAAGTTCGAGGGCTTCATCCAGACGTACCAGGGGAAGTTCTACGTAGAGCCAGCGGAGAGATACCTGAAGGACCGGGACGTTCCCTTCCACTCCGTTATCTACCACGAGGACGACATCAacTATCCCCATAAGTATGGTCCGGAGGGGGGCTGTGCCGACCACTCAGTGTTTGAGAGGATGAAAACGTACCAAGCCACTGCCATAGAGAAGCCAGACAAGggGCTCCATTCTGAGGAGGCGTCCAGTGACCCGGTGTtgctgaggaagaggaggatggctcAGATAGAGAAGAACACCTGTCAGCTCTTCATCCAGACAGACCACCTCTTCTTCAAGTACTACAAGACCAGGGAAGCTGTTATCGCACAGATCTCTAGTCACATCAAGGCTATAGATGCCATCTACCAGGGAACAGACTTCATGGGCATCCGCAACATCAGCTTTATGGTCAAGAGGATACGGATCAACACCACTACAGATGAGCGGGACCGGTCCAACCCGTTCCGCTTCGCTAACATCGGCGTGGAGAAGTTCCTGGAGCTGAACTCTGAGCAGAACCACGACGACTACTGTCTGGCCTACGTCTTCACTGACAGGGACTTTGATGATGGTGTGCTGGGTCTGGCCTGGGTCGGAGCTCCTGCAGGAAGTTCTGGAGGGATCTGTGAGAAGAGTAAGCTGTACTCTGACGGGAAGAAGAAGTCCCTGAATACCGGCATCATCACAGTGCAGAACTACGCCTCCCACGTCCCCCCTAAAGTCTCACACATCACCTTTGCACATGAAATAGGACACAACTTTGGCTCGCCTCATGACTCGGGGTCGGAGTGCACCCCGGGGGAGTCTAAGGCCCAGGATAAGAAGGAGAAGGGGAACTACATCATGTACGCCCGGGCCACATCAGGAGACAAGCTCAATAACAACAAGTTCTCCGTCTGTAGCGTCAGGAACATCAGCCAGGTcctggagaagaagaggggaagCTGCTTTGTCGAGTCAGGCCAGCCCATCTGTGGTAATGGGTTAGTGGAGCCAGGGGAGGAGTGTGACTGTGGATACAGCGATCAGTGCAGAGACCAGTGTTGCTATGACGCCGGGCAGCCTGACAACAGGAAGTGTAAACTAAAACCCAACAAAGTCTGCAGtcCTAGCCAGGGCCTGTGCTGTACTCCTGAGTGCTTCTATAAGGGTCGTAATGAGAAGTGTCGTGAAGAGTCTGAGTGTGCCCATCAGGGCATGTGTAACGGGGGTACGGCCCAGTGCCCCACCTCTGAACCCAAGGCCAACTTCACCGCCTGCCACGGAGAGACTCAAGTCTGCCTCAACGGGGGGTGTTCTGGATCCATCTGTGAGAAGTATGGTCTGGAGGTCTGTACCTGTGCCAGCGTGGAGGGCAAGGACGAGACTGACGAGCTGTGCCACGTCTGCTGTGGCGAGAAGATGAACCCCAACACCTGCAGCAGTACAGGCTCAGAGAAACTGGCCCGGTTCTTCAATAAGAAAATCACCACGCTGCCTGCGGGGTCTCCCTGTAACGACTTCAAGGGCTACTGTGACGTGTTCATGAGGTGTCGGCTGGTGGACGCGGATGGCCCTCTGGCCAGACTGAAGAAGGCCATCTTCAACCCTGAACTCTATGAAAACATTGCAGAGTGGATAGTGGCTCACTGGTGGGCAGTGCTATTGATGGGTATCGCTCTGATCATGCTGATGGCTGGCTTCATTAAGATCTGTAGTGTCCACACTCCCTCCAGCAACCCCAAACTGCCCCCACCCAAACCACTACCAGGCACgttgaagaggaggagagccCAGCAGCAGGCCAGGGAGGCCCAGGTGCACCAGTCCCAGTCGCACCATGGAGGTGTCGGTCACGGCCAGCACCACCCTGTCTCTGGGGGCCAGCGGCAGCAGCCCTCACGCCAGCCTCAGCCCCAGAGGCACCACCGCAGCCAGGGTCAGCCTAGAGAAAACTACCAGATGGGCCAGATGAGACGCTGAGCTGCTGAGACACTGGGGTTCGGGGTGGGGGGACGCTGTTCCCTCCATCGCCTGCTCCTTGCCTTGCCTTGGCTCCTCCTTGTGCCTATTTATGTCACTGCTGGGATTGAGATTTGAACCCATTTGTTGGTATTTGATTGAACCCATGTCTCCAGGGTGGAAATCCCACCTCTTCACCATTTAAACCTAGAGGATATTCTTAGATGTTTTATGATTTAGGATCGATGGAATTGAGGGAAAGAAAAGGGAACAACACTTTTAGTTTTTACACTATGGTTAAGGCGTTGTGTTGCCACGTGGGAGACCCGGATTCAAATCACACCGGTTTACACCTAACAGTGGGATAAAACACGTGCTTCGCTCCACCCAAAGAACAGCCTAAACTGGTTGTTTATACCATCCCCATACGTCAGACCCTCCATCTgcaaacagacaaacaggaagGAGTTGAGAAAGCTCAAAGACCCCCTCCAACTACCACCACTAGAGCTGCAGCACAGCTGACCTCTTtaaataaagacctcctccaacGACCACCACTAGAGCTGCAGCACAGCTGACCTCTTCAAATAACCACCACTAGAGCTGCAGCACCGCTGACCTCTTtaaataaagacctcctccaacGACCACCACTAGAGCTGCAGCACCGCTGACCTCTTCAAGTAACCACCACTAGAGCTACAGCCCAGCTGACCTCTTCAAATAACCACCACTAGAGCTGCAGCACCGCTGACCTCTTtaaataaagacctcctccaacGACCACCACTGGAGCTGCAGCACAGCTGACCTCTCcaaataaagacctcctccaacGACCACCACTGGAGCTGCAGCACCGCTGACCTCTTcaaataaagacctcctccaacGACCACCACTGGAGCTGCAGCACAGCTGACCTCTTcaaataaagacctcctccaacGACCACCACTGGAGCTGCAGCACCGCTGACCTCTTcaaataaagacctcctccaacGACCACCACTGGAGCTGCAGCACAGCTGACCTCTTCA

Function

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 10-like isoform X2

GO: NA

KEGG:

id description
K06704 ADAM10, CD156c; disintegrin and metalloproteinase domain-containing protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036960784.1 True 3511 mRNA 0.53 16 99636736 99678499

Neighbor

gene id symbol gene type direction distance location
duox2 LOC106561732 coding upstream 39128 99581865 ~ 99597608 (+)
LOC110500866 cep152 coding upstream 425796 99207967 ~ 99210940 (+)
LOC110502545 cep152 coding upstream 429576 99188901 ~ 99207160 (+)
cops2 cops2 coding upstream 455839 99166363 ~ 99180897 (+)
atp8b4 atp8b4 coding upstream 484621 99089674 ~ 99152115 (+)
LOC110502581 LOC106561777 coding downstream 99196 99777695 ~ 99818794 (+)
LOC110502588 LOC106584738 coding downstream 157119 99835618 ~ 99877214 (+)
LOC118943910 NA coding downstream 205655 99884154 ~ 99891769 (+)
LOC110500919 LOC106584740 coding downstream 218723 99896619 ~ 99899881 (+)
LOC110500932 LOC106561787 coding downstream 227141 99905640 ~ 99951756 (+)
G210973 NA non-coding upstream 3286 99633161 ~ 99633450 (+)
G210972 NA non-coding upstream 4524 99631226 ~ 99632212 (+)
G210969 NA non-coding upstream 16082 99620197 ~ 99620654 (+)
G210966 NA non-coding upstream 20806 99615710 ~ 99615930 (+)
G211057 NA non-coding downstream 166493 99844992 ~ 99849321 (+)
G211054 NA non-coding downstream 199225 99877724 ~ 99878161 (+)
G211071 NA non-coding downstream 203300 99881799 ~ 99882331 (+)
G211077 NA non-coding downstream 225600 99904099 ~ 99904439 (+)
G210823 LOC106561768 other upstream 398478 99237378 ~ 99238258 (+)
G210484 NA other upstream 710330 98902788 ~ 98926406 (+)
LOC110510476 LOC106561728 other upstream 737198 98897524 ~ 98944948 (+)
G210408 NA other upstream 936344 98697168 ~ 98700392 (+)
G209759 NA other upstream 1678900 97957244 ~ 97958896 (+)
G210983 LOC106561766 other downstream 41680 99720179 ~ 99721983 (+)
G211779 NA other downstream 781158 100459657 ~ 100461981 (+)
G211809 LOC107574289 other downstream 789179 100467678 ~ 100468157 (+)

Expression


Co-expression Network