XLOC_020747



Basic Information


Item Value
gene id XLOC_020747
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 3347513 ~ 3347884 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042297
ATTGAACCAGCTCATGATCAACAAGCAAGAGCCAGGTTAAACCAGCACATGGCCAGTAAAAATCAGCTTAAACTAGCTCAAGACCagtaagaaccagcttaaaccagctcatgactaACAAAAAACTTAAGTCAGCTCATAACTTGTGGGAACCACCTTAAATAATTTCACAATGACCAACAATAACCTTCTTAAACCAGGTCAGTAAGAAATCAGAACAGTAAGAAACAGATCAAACCAGCTCAAGACCAGTAAGAACCAACTTAAACCAGCCAATGACAAACAATAACCAGCTCAAGACCAGTAAGAACCATCTTAAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042297 True 320 lncRNA 0.39 2 3347513 3347884

Neighbor


gene id symbol gene type direction distance location
XLOC_020746 tbxa2r coding downstream 2900 3336723 ~ 3344613 (-)
XLOC_020745 si:zfos-943e10.1 coding downstream 48158 3262413 ~ 3299355 (-)
XLOC_020744 gpr35.1 coding downstream 85634 3252936 ~ 3261879 (-)
XLOC_020743 lonp1 coding downstream 164548 3160447 ~ 3182965 (-)
XLOC_020742 lmnb2 coding downstream 195156 3121086 ~ 3152357 (-)
XLOC_020748 ptprsa coding upstream 41463 3389347 ~ 3680725 (-)
XLOC_020749 NA coding upstream 392702 3740586 ~ 3741284 (-)
XLOC_020750 NA coding upstream 535723 3883607 ~ 3886684 (-)
XLOC_020751 mhc1uma coding upstream 562726 3910610 ~ 3914222 (-)
XLOC_020752 CU074310.1 coding upstream 963919 4311803 ~ 4313118 (-)
XLOC_020738 NA non-coding downstream 454967 2889663 ~ 2892546 (-)
XLOC_020736 NA non-coding downstream 519427 2814463 ~ 2828086 (-)
XLOC_020734 NA non-coding downstream 521812 2795028 ~ 2825701 (-)
XLOC_020735 NA non-coding downstream 540486 2799465 ~ 2807027 (-)
XLOC_020733 NA non-coding downstream 557975 2769742 ~ 2789538 (-)
XLOC_020756 NA non-coding upstream 1385123 4733007 ~ 4735337 (-)
XLOC_020765 NA non-coding upstream 1505178 4853062 ~ 4853815 (-)

Expression



Co-expression Network