Item | Value |
---|---|
gene id | LOC110500932 |
gene name | LOC106561787 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048566.1 |
NCBI id | CM023220.2 |
chromosome length | 103806877 |
location | 99905640 ~ 99951756 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
id | name | namespace |
---|---|---|
GO:0016459 | myosin complex | cellular_component |
GO:0005524 | ATP binding | molecular_function |
GO:0051015 | actin filament binding | molecular_function |
GO:0003774 | motor activity | molecular_function |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036960820.1 | False | 6124 | mRNA | 0.52 | 40 | 99905640 | 99951701 |
XM_036960824.1 | False | 5717 | mRNA | 0.52 | 38 | 99913244 | 99951701 |
TU239255 | True | 359 | lncRNA | 0.36 | 1 | 99951398 | 99951756 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110500919 | LOC106584740 | coding | upstream | 5759 | 99896619 ~ 99899881 (+) |
LOC118943910 | NA | coding | upstream | 13871 | 99884154 ~ 99891769 (+) |
LOC110502588 | LOC106584738 | coding | upstream | 28426 | 99835618 ~ 99877214 (+) |
LOC110502581 | LOC106561777 | coding | upstream | 86846 | 99777695 ~ 99818794 (+) |
LOC110502564 | LOC106584732 | coding | upstream | 227141 | 99636736 ~ 99678499 (+) |
LOC110502593 | myo5c | coding | downstream | 1562 | 99953263 ~ 100008473 (+) |
LOC110500941 | LOC106561786 | coding | downstream | 60052 | 100011753 ~ 100027473 (+) |
LOC110500952 | LOC106561785 | coding | downstream | 86498 | 100038199 ~ 100049521 (+) |
LOC110502598 | LOC106584747 | coding | downstream | 100151 | 100051852 ~ 100078410 (+) |
LOC110500984 | LOC106584750 | coding | downstream | 181433 | 100133134 ~ 100140576 (+) |
G211077 | NA | non-coding | upstream | 1201 | 99904099 ~ 99904439 (+) |
G211071 | NA | non-coding | upstream | 23309 | 99881799 ~ 99882331 (+) |
G211054 | NA | non-coding | upstream | 27479 | 99877724 ~ 99878161 (+) |
G211057 | NA | non-coding | upstream | 56319 | 99844992 ~ 99849321 (+) |
G210982 | NA | non-coding | upstream | 246162 | 99656774 ~ 99659478 (+) |
G211087 | NA | non-coding | downstream | 20374 | 99972075 ~ 99973929 (+) |
G211098 | NA | non-coding | downstream | 41861 | 99993562 ~ 99994333 (+) |
G211102 | NA | non-coding | downstream | 53350 | 100005051 ~ 100005413 (+) |
G211476 | NA | non-coding | downstream | 57310 | 100009011 ~ 100009239 (+) |
G211488 | NA | non-coding | downstream | 66679 | 100018380 ~ 100019107 (+) |
G210983 | LOC106561766 | other | upstream | 183657 | 99720179 ~ 99721983 (+) |
G210823 | LOC106561768 | other | upstream | 667382 | 99237378 ~ 99238258 (+) |
G210484 | NA | other | upstream | 979234 | 98902788 ~ 98926406 (+) |
G211779 | NA | other | downstream | 507956 | 100459657 ~ 100461981 (+) |
G211809 | LOC107574289 | other | downstream | 515977 | 100467678 ~ 100468157 (+) |
G212656 | NA | other | downstream | 1530710 | 101482181 ~ 101486796 (+) |
G212674 | NA | other | downstream | 1558059 | 101509760 ~ 101516104 (+) |
G212690 | NA | other | downstream | 1602684 | 101554385 ~ 101561158 (+) |