XLOC_020749



Basic Information


Item Value
gene id XLOC_020749
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 3740586 ~ 3741284 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00042298
GATTTATGGTGTTTTACTCTTGGGCAAACAATATAAACACAAGAAGTGCATTTTATTTGCAGTCTGATTTAAAAAAACGactaatgtataaaataaatttgatatatttgtCAATGGTTCTAGGTTTGGTTCTATTTAGTCAGTCGCTGAAAAATACAACACGAAAAATTGGCTTTTACGCTAACATTTTGTCTAATGTTTCGACAAATAACATTTTATCACGCTAACATTTTGACAAAACGATTTGTTGCGTTTTTGTTTCCCCAAAACTCCAGGATTCGAGACTTGTTGTGTGTGagatttattgtgtttttctCTTGGGCAAACAATATAAACACAAGAAGTGCATTTTATTTGCAGTCTGATTTAAAAAAACGactaatgtataaaataaatttgat

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00042298 True 401 lncRNA 0.30 2 3740586 3741284

Neighbor


gene id symbol gene type direction distance location
XLOC_020748 ptprsa coding downstream 59861 3389347 ~ 3680725 (-)
XLOC_020747 NA coding downstream 392702 3347513 ~ 3347884 (-)
XLOC_020746 tbxa2r coding downstream 395973 3336723 ~ 3344613 (-)
XLOC_020745 si:zfos-943e10.1 coding downstream 441231 3262413 ~ 3299355 (-)
XLOC_020744 gpr35.1 coding downstream 478707 3252936 ~ 3261879 (-)
XLOC_020750 NA coding upstream 142323 3883607 ~ 3886684 (-)
XLOC_020751 mhc1uma coding upstream 169326 3910610 ~ 3914222 (-)
XLOC_020752 CU074310.1 coding upstream 570519 4311803 ~ 4313118 (-)
XLOC_020753 kdm4b coding upstream 572321 4313605 ~ 4407871 (-)
XLOC_020754 uhrf1 coding upstream 667359 4408643 ~ 4439311 (-)
XLOC_020738 NA non-coding downstream 848040 2889663 ~ 2892546 (-)
XLOC_020736 NA non-coding downstream 912500 2814463 ~ 2828086 (-)
XLOC_020734 NA non-coding downstream 914885 2795028 ~ 2825701 (-)
XLOC_020756 NA non-coding upstream 991723 4733007 ~ 4735337 (-)
XLOC_020765 NA non-coding upstream 1111778 4853062 ~ 4853815 (-)
XLOC_020777 CR936300.1 non-coding upstream 1399246 5140530 ~ 5145022 (-)
XLOC_020735 NA non-coding downstream 933559 2799465 ~ 2807027 (-)

Expression



Co-expression Network