XLOC_020750


Basic Information

Item Value
gene id XLOC_020750
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 3883607 ~ 3886684 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042299
CTCCAGAGCATTGGCGGCTAACACTAGCACTGCAAGTTTAAAATTAGCCTCGTCTCCAGTGTGCTAGTGTGAAACTGAGCCACCGGGTGGGTGTTGATGTTCACACCATTCGCTTTCATTTCCATCTCGCCGAGGTGTGGAGATGAGGCGACTTCTGTTTCCGTCATTATGACTCCAAACGTGGCCTGGCCGTTTGATTCTGCCGCCATTTATGCCAAAACACGGAGACTGGAGACGGGAAAAGGCGTGTTTGTCCATTCAGGCTCATTAGAAAACGTTTCTCCTCATTCTGTGGTTTGGCGCAGACGGGATATAGTTTCCTCACTGGCAGAGATGTTTTCACTGCCTAAGCTATCCTCAGTTCTGCATTACATGGTACATGCACTGAATAGAGTGCCTCTACAGTACAACACAGCGGCTGAGATCACTCAAGGATATCAACTCAAATCAATTGTCTGAGATTTGGTCCATCTCTTGCTTTAAAACTCCACGCATTAGCAAACGTCAAGCTCAAACAAAGCCATCACGGCCTCCTCTCGGGTCCCGTCCTCATCCCGTCGAAAGCCTTCCAGACAAAATCAATATCCGGCTCTCGGCTCTCCTTCGTCCCACACCTGAGTCATTAAAATCAGCCAGCAAAGTCATCGCGGTTGCATCTGGCCGTCGCAGACGTTTATCAGCCCACATCCGCTGTTAATTGCACATTTGGTAGGCCTCCAGAACGGCCGGAGATGTTTGATAAAGTGACCCTTTATGATGAAATATGGCGAGGCACTTCTGCAGACTATCAAAGCGCATTCGGGATTGAGCCCCTTTGAAGTCATTAATTGGAAAGAGGCAGGGCTGGAAATTAACAAGGGCTCGCGGCGAAAATAATTATGTGGGGAAATATGTGGggccaaaaaaatttaaataaaaaatgctgttgTAATGAATT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042299 True 937 lncRNA 0.47 2 3883607 3886684

Neighbor

gene id symbol gene type direction distance location
XLOC_020749 NA coding downstream 142323 3740586 ~ 3741284 (-)
XLOC_020748 ptprsa coding downstream 202882 3389347 ~ 3680725 (-)
XLOC_020747 NA coding downstream 535723 3347513 ~ 3347884 (-)
XLOC_020746 tbxa2r coding downstream 538994 3336723 ~ 3344613 (-)
XLOC_020745 si:zfos-943e10.1 coding downstream 584252 3262413 ~ 3299355 (-)
XLOC_020751 mhc1uma coding upstream 23926 3910610 ~ 3914222 (-)
XLOC_020752 CU074310.1 coding upstream 425119 4311803 ~ 4313118 (-)
XLOC_020753 kdm4b coding upstream 426921 4313605 ~ 4407871 (-)
XLOC_020754 uhrf1 coding upstream 521959 4408643 ~ 4439311 (-)
XLOC_020755 fbn2b coding upstream 637683 4524367 ~ 4649238 (-)
XLOC_020738 NA non-coding downstream 991061 2889663 ~ 2892546 (-)
XLOC_020736 NA non-coding downstream 1055521 2814463 ~ 2828086 (-)
XLOC_020734 NA non-coding downstream 1057906 2795028 ~ 2825701 (-)
XLOC_020756 NA non-coding upstream 846323 4733007 ~ 4735337 (-)
XLOC_020765 NA non-coding upstream 966378 4853062 ~ 4853815 (-)
XLOC_020777 CR936300.1 non-coding upstream 1253846 5140530 ~ 5145022 (-)
XLOC_020780 NA non-coding upstream 1380839 5267523 ~ 5274962 (-)

Expression


Co-expression Network