LOC118944013


Basic Information

Item Value
gene id LOC118944013
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101536030 ~ 101536754 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039304.1
CACAATGACCCATATAACATAGTATTACCCCCCTGACGGTGCTATAGGGAGAGACCTAGAAGCAGGGTAACTAGAGATTATTATGTAGTCTGGGTGTTCTATAATACTAGAAGCAGGGTAACTAGAGATTATTATGTAGTCTGGGTGTTCTATAATACTAGAAGCAGGGTAACTAGGGATTATTATGTAGTCTGGGTGTTCTAGAAGCAGGGTAACTAGGGATTATTATGTAGTCTGGGTGTTCTAGAAGCAGGGTAACTAGGGATTATTATGTAGTCTGGGTGTTCTAGAAGCAGGGTAACTAGGGATTATTATGTAGTCTGGGTGTTCTAGAAGCAGGGTAACTAGGGATTATTATGTAGTCTGGGTGTTCTATAATACTAGAAGCAGGTAACTAGGGATTATTATGTAGTCTGGGTGTTCTATAATACTAGAAGCAGGGTAACTAGGGATTATTATGTAGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039304.1 True 466 mRNA 0.40 3 101536030 101536754

Neighbor

gene id symbol gene type direction distance location
pgghg pgghg coding downstream 85866 101414312 ~ 101450164 (-)
incenp inceb coding downstream 127193 101394024 ~ 101408837 (-)
fth1b frih coding downstream 142465 101374491 ~ 101393565 (-)
LOC110501267 LOC106584791 coding downstream 192616 101318996 ~ 101343789 (-)
LOC110501260 NA coding downstream 225820 101306077 ~ 101310210 (-)
LOC110512506 LOC106590753 coding upstream 23513 101560267 ~ 101595386 (-)
LOC118944014 NA coding upstream 164632 101701386 ~ 101703960 (-)
LOC118944015 NA coding upstream 169251 101706005 ~ 101706647 (-)
LOC110517830 LOC105018063 coding upstream 208514 101743015 ~ 101746551 (-)
LOC110501407 LOC106561868 coding upstream 376230 101912984 ~ 101916443 (-)
G212768 LOC106592832 non-coding downstream 14100 101521092 ~ 101521930 (-)
G212764 NA non-coding downstream 26292 101508773 ~ 101509738 (-)
G212747 NA non-coding downstream 59558 101476053 ~ 101476472 (-)
G212649 NA non-coding downstream 63915 101471827 ~ 101472115 (-)
G212644 NA non-coding downstream 68606 101467219 ~ 101467424 (-)
G212739 NA non-coding upstream 17648 101554402 ~ 101556378 (-)
G212784 NA non-coding upstream 61262 101598016 ~ 101598241 (-)
G212785 NA non-coding upstream 70039 101606793 ~ 101607517 (-)
G212786 NA non-coding upstream 71847 101608601 ~ 101608827 (-)
G212787 NA non-coding upstream 76733 101613487 ~ 101613690 (-)
LOC110502631 LOC106592148 other downstream 356269 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 821777 100662972 ~ 100716213 (-)
LOC110502607 ano5 other downstream 1056240 100461545 ~ 100543552 (-)
G211904 LOC100136012 other downstream 1080597 100455149 ~ 100455433 (-)
LOC110500995 LOC106561801 other downstream 1376075 100155072 ~ 100161971 (-)
G212829 LOC106613263 other upstream 175484 101712238 ~ 101712847 (-)
G212836 NA other upstream 182613 101719367 ~ 101719732 (-)
G213475 NA other upstream 849375 102386129 ~ 102531578 (-)
G214030 NA other upstream 1282614 102819368 ~ 102819829 (-)

Expression


Co-expression Network