LOC118944015


Basic Information

Item Value
gene id LOC118944015
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 101706005 ~ 101706647 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039310.1
CATACCAGGTGAAGACGGTCATGTGACTTTATTAGAACAGACATACCAGGTGAAGACGGTCATGTGACTTTAATAGAACAGACATACCAGGTGAAGACGGTCATGTGACTTTAATAGAACAGACATACCAGGCGAATAAGGACAGTCATGTGACTTTAATAGAACAGACATACCAGGTGAAGACGGTCATGTGACTTTAATAGAACAGACATACCAGGCGAATAAGGACAGTCATGTGACTTTAATAGAACAGACATACCAGGTGAAGATGGTCATGTGACTTTAATAGAACAGTAAATGTTGAAGGAAACTGGAAATACAACATCTCATTGTAAAACAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039310.1 True 340 mRNA 0.39 2 101706005 101706647

Neighbor

gene id symbol gene type direction distance location
LOC118944014 NA coding downstream 2045 101701386 ~ 101703960 (-)
LOC110512506 LOC106590753 coding downstream 110619 101560267 ~ 101595386 (-)
LOC110501253 LOC106584787 coding downstream 152255 101482142 ~ 101553750 (-)
LOC118944013 NA coding downstream 169251 101536030 ~ 101536754 (-)
pgghg pgghg coding downstream 255841 101414312 ~ 101450164 (-)
LOC110517830 LOC105018063 coding upstream 38621 101743015 ~ 101746551 (-)
LOC110501407 LOC106561868 coding upstream 206337 101912984 ~ 101916443 (-)
LOC110501416 LOC106561859 coding upstream 291152 101997799 ~ 102000087 (-)
commd4 comd4 coding upstream 581248 102287895 ~ 102292356 (-)
LOC110501505 LOC106561846 coding upstream 719410 102426057 ~ 102444259 (-)
G212823 NA non-coding downstream 11434 101694232 ~ 101694571 (-)
G212817 NA non-coding downstream 48054 101655495 ~ 101657951 (-)
G212811 NA non-coding downstream 59781 101645642 ~ 101646224 (-)
G212805 NA non-coding downstream 68925 101635758 ~ 101637080 (-)
G212800 NA non-coding downstream 70891 101627752 ~ 101635114 (-)
G212825 NA non-coding upstream 972 101707619 ~ 101707924 (-)
G212838 NA non-coding upstream 13475 101720122 ~ 101721030 (-)
G212840 NA non-coding upstream 14734 101721381 ~ 101721641 (-)
G212841 NA non-coding upstream 15160 101721807 ~ 101722089 (-)
G212848 NA non-coding upstream 20138 101726785 ~ 101727027 (-)
LOC110502631 LOC106592148 other downstream 526244 100976119 ~ 101191014 (-)
pkp3a pkp3 other downstream 991752 100662972 ~ 100716213 (-)
LOC110502607 ano5 other downstream 1226215 100461545 ~ 100543552 (-)
G211904 LOC100136012 other downstream 1250572 100455149 ~ 100455433 (-)
LOC110500995 LOC106561801 other downstream 1546050 100155072 ~ 100161971 (-)
G212829 LOC106613263 other upstream 5591 101712238 ~ 101712847 (-)
G212836 NA other upstream 12720 101719367 ~ 101719732 (-)
G213475 NA other upstream 679482 102386129 ~ 102531578 (-)
G214030 NA other upstream 1112721 102819368 ~ 102819829 (-)

Expression


Co-expression Network