G103772


Basic Information

Item Value
gene id G103772
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 20661 ~ 20865 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116404
gggtggtcaTTTGGGGGCACTGACTCCAGTTTTAATGAGGCTGTCAGGCCGTGTTGGTCATTTTAAATAATTATCTCTCTGCACTGCCAGAGCACCAACCACTGTAATATTACTAACTGCTGTTAATACAACTCAGATAGAGGCCGACatacaacacccacacacacacatatacacacacaccgacccGCCAGCTGAGACAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116404 True 205 lncRNA 0.43 1 20661 20865

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 2565 13864 ~ 18096 (+)
LOC110512917 csmd3 coding downstream 128317 149182 ~ 672194 (+)
zgc:110410 LOC106594189 coding downstream 693865 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 703926 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 839594 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 884711 905576 ~ 908576 (+)
G103771 NA non-coding upstream 1342 18899 ~ 19319 (+)
G103774 NA non-coding downstream 4839 25704 ~ 30038 (+)
G103778 NA non-coding downstream 11032 31897 ~ 32592 (+)
G103786 NA non-coding downstream 28407 49272 ~ 49615 (+)
G103790 NA non-coding downstream 33664 54529 ~ 55223 (+)
G103826 NA non-coding downstream 99467 120332 ~ 120836 (+)
G103851 NA other downstream 154131 174996 ~ 181022 (+)
G104092 NA other downstream 669181 690046 ~ 701271 (+)
G104761 NA other downstream 1132196 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1288413 1309202 ~ 1390936 (+)

Expression

G103772 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
End of interactive chart.

G103772 Expression in each Bioproject

Bar chart with 11 bars.
G103772 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
End of interactive chart.

Co-expression Network