G103774


Basic Information

Item Value
gene id G103774
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 25704 ~ 30038 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116407
gtttattctcgagagctcTGCCTATCATGTCCGGTACATTGGTCTATCTGTAGACCTCACATTTCCatcataaatgtccctcctcctctcagatacaaCGGCAACAttagttcacaagccttctcacattgtctgccacctgttaaaaCAATCTACCacaagcccaaggtctctcccctccccgGGTAGAGACaggatgtcctgtaaggaacgCCGTAGTCCAGCATTTCACACTTGCACCCTGCTTACATactaaaaaggaacagaaagtccttgttctaattctggACCGAAACTACACACATTAGATTTAGTGTTATGATTACAATAAGgttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaata
>TU116408
aatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtagtattctgttggttatagtttcatacagtgacagggtagtattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtattattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttcatacagtgacagggtaatattctgttggttatagttca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116407 False 1132 lncRNA 0.49 2 25704 26873
TU116408 True 986 lncRNA 0.43 3 27388 30038

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 7608 13864 ~ 18096 (+)
LOC110512917 csmd3 coding downstream 119144 149182 ~ 672194 (+)
zgc:110410 LOC106594189 coding downstream 684692 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 694753 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 830421 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 875538 905576 ~ 908576 (+)
G103772 NA non-coding upstream 4839 20661 ~ 20865 (+)
G103771 NA non-coding upstream 6385 18899 ~ 19319 (+)
G103778 NA non-coding downstream 1859 31897 ~ 32592 (+)
G103786 NA non-coding downstream 19234 49272 ~ 49615 (+)
G103790 NA non-coding downstream 24491 54529 ~ 55223 (+)
G103826 NA non-coding downstream 90294 120332 ~ 120836 (+)
G103827 NA non-coding downstream 91201 121239 ~ 123282 (+)
G103851 NA other downstream 144958 174996 ~ 181022 (+)
G104092 NA other downstream 660008 690046 ~ 701271 (+)
G104761 NA other downstream 1123023 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1279240 1309202 ~ 1390936 (+)

Expression


Co-expression Network