XLOC_020756


Basic Information

Item Value
gene id XLOC_020756
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 4733007 ~ 4735337 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042300
tatccttctGTCAGTATTAAACGTTATACAATatattgcattaataaaatcaGACTCAATAAAATCCCAACAACCAAATATGTAAAATTCATCCTCAGAGAAACAATCGCAGGTCATTTTAAGACTAAGAATAAACAGagtaggacacacacacacacacagctttcagACAAAAGGCTCAGGTTATGGCTATGGTGCAAATAAATGTACGCTAGTTGTGTGAATGTactttaaacaatattaatttccAGCACTATTCAGAATAGAAAAAATGCTTCACCCTCAGTACATGGGGCGAATTTATTATTAAGAAAAATCATGGTCCTCAAATCAAAAAAATGTCCTCAAATCTACACTTTTCAAGCAAAAATCATCAGTTTTGTAGCTTGATATAGCAGTGCTCAACAAAAAAAGTGCCTCTTACAAAACCACAAGCTCCAGTAGTAAAATCACAAACACAAATGGATATTTCACCACAAGATGGCGCTAAAAGTCTTTTCTAGATATCCACCGATGCCTGTTCTAGAAAAACAAGAGCATCTGCAGACAAGTCACAGATTTTCACACAACTTAAACGACTAACATCTCCAAATTAACCCTATGAGAAGTACTACAAAAGGTGCATCTACATGTAGTCACTCTCAGAAGAGTTTATATTTCTGTTCCATACTGAACAGTAGTAGCACTTTAGTTTGAACAGCATTCATTACAGTTCAACAATTTAATACTTCACGGCCCAGTtgcacaaacagggcttagattaggccaggactaggccttagttaaattacACTATTTAAGTCACATTTATAAAAAAGCccttagaaaaaatatattactggtgtgcccctggagacaaaaaatgacactgacgtattttaagacatctcactgCAAGATGCAGCTTAAACATTctatttaatcttgactagccttaaacctggTTTGTGAAAGCAGGGGCACATGTGTTCATGAATCATTTTAATGCacaccttttaatttttttaaagtattactaaaGTGCCAATTAgactcattttaaacaaataaaagagtTCACTTTGTATGGATTTCGAACACACTGTAATGGTAACAacataaattgtattatttattatagttatgAAACCAAAATATGAAGTTAAGAGTTAAACCTTGACAAACAAGAAAGCTAAGAAAGTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042300 True 1184 lncRNA 0.34 2 4733007 4735337

Neighbor

gene id symbol gene type direction distance location
XLOC_020755 fbn2b coding downstream 83769 4524367 ~ 4649238 (-)
XLOC_020754 uhrf1 coding downstream 293696 4408643 ~ 4439311 (-)
XLOC_020753 kdm4b coding downstream 325136 4313605 ~ 4407871 (-)
XLOC_020752 CU074310.1 coding downstream 419889 4311803 ~ 4313118 (-)
XLOC_020751 mhc1uma coding downstream 818785 3910610 ~ 3914222 (-)
XLOC_020757 CR751224.1 coding upstream 99 4735436 ~ 4742866 (-)
XLOC_020758 rad23ab coding upstream 9768 4745105 ~ 4760187 (-)
XLOC_020759 calr3a coding upstream 27141 4762478 ~ 4769140 (-)
XLOC_020760 si:ch73-256j6.5 coding upstream 37523 4772860 ~ 4868321 (-)
XLOC_020761 CU570881.2 coding upstream 46950 4782287 ~ 4813345 (-)
XLOC_020750 NA non-coding downstream 846323 3883607 ~ 3886684 (-)
XLOC_020749 NA non-coding downstream 991723 3740586 ~ 3741284 (-)
XLOC_020747 NA non-coding downstream 1385123 3347513 ~ 3347884 (-)
XLOC_020738 NA non-coding downstream 1840461 2889663 ~ 2892546 (-)
XLOC_020765 NA non-coding upstream 117725 4853062 ~ 4853815 (-)
XLOC_020777 CR936300.1 non-coding upstream 405193 5140530 ~ 5145022 (-)
XLOC_020780 NA non-coding upstream 532186 5267523 ~ 5274962 (-)
XLOC_020781 NA non-coding upstream 577634 5312971 ~ 5315589 (-)
XLOC_020784 NA non-coding upstream 717906 5453243 ~ 5463115 (-)

Expression


Co-expression Network