G103790


Basic Information

Item Value
gene id G103790
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54529 ~ 55223 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116427
GGTGATTAGGGGTGGTTCAGTCTATAGAGACAGTGGGTGATTAGTGGTGGTTCAGGCTATAGAGACAGTGGGTGATTAGTGGTGGTTCAGGCTATAGAGCCAGTGGGTGATTAGGGGTGGTTCAGGCTATAGAGACAGTGGGTGATTAGTGGTGGTTCAGTCTATAGAGACAGTGGGTGATTAGTGGTGGTTCAGGCTATAGAGACAGTGGGTGATTAGGGGTGGTTCAGTCTATAGAGCCAGTGGGTGATTAGTGGTGGTTCAGGCTATAGAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116427 True 275 lncRNA 0.49 2 54529 55223

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 36433 13864 ~ 18096 (+)
LOC110512917 csmd3 coding downstream 93959 149182 ~ 672194 (+)
zgc:110410 LOC106594189 coding downstream 659507 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 669568 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 805236 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 850353 905576 ~ 908576 (+)
G103786 NA non-coding upstream 4914 49272 ~ 49615 (+)
G103778 NA non-coding upstream 21937 31897 ~ 32592 (+)
G103774 NA non-coding upstream 24491 25704 ~ 30038 (+)
G103772 NA non-coding upstream 33664 20661 ~ 20865 (+)
G103771 NA non-coding upstream 35210 18899 ~ 19319 (+)
G103826 NA non-coding downstream 65109 120332 ~ 120836 (+)
G103827 NA non-coding downstream 66016 121239 ~ 123282 (+)
G103798 NA non-coding downstream 114610 169833 ~ 181660 (+)
G103853 NA non-coding downstream 128651 183874 ~ 184430 (+)
G103862 NA non-coding downstream 145517 200740 ~ 202233 (+)
G103851 NA other downstream 119773 174996 ~ 181022 (+)
G104092 NA other downstream 634823 690046 ~ 701271 (+)
G104761 NA other downstream 1097838 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1254055 1309202 ~ 1390936 (+)

Expression


Co-expression Network