G103827


Basic Information

Item Value
gene id G103827
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 121239 ~ 123282 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116471
ctatttagaccatgaccctattccccatgtggagcactatttagaccagggctctattccctatgtagagcactatttagaccagggccctattccctatgtagagcactatttagaccatggccctattccccatgtggagcactatttagaccagggccctattccctatgtagagcactatttagaccagggccctattccctatatatagagcactattttgaccagggccctattccctatgtagagcactactgtagaccagggccctattccgtatgtagaccactactttagaccaggaccctattccctatgtagagcactactttagaccagagccctattccctatatagagcactattttgaccagagccatattccctatatagagcactactttgaccagggccctattccctatatagagcactactttagaccagggccctattccctatgtagagcactactttagaccagggccctattccctatatagagcactactttagaccagggccctattccctatgtagagcactact

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116471 True 553 lncRNA 0.48 2 121239 123282

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 103143 13864 ~ 18096 (+)
LOC110512917 csmd3 coding downstream 25900 149182 ~ 672194 (+)
zgc:110410 LOC106594189 coding downstream 591448 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 601509 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 737177 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 782294 905576 ~ 908576 (+)
G103826 NA non-coding upstream 403 120332 ~ 120836 (+)
G103790 NA non-coding upstream 66016 54529 ~ 55223 (+)
G103786 NA non-coding upstream 71624 49272 ~ 49615 (+)
G103778 NA non-coding upstream 88647 31897 ~ 32592 (+)
G103774 NA non-coding upstream 91201 25704 ~ 30038 (+)
G103798 NA non-coding downstream 46551 169833 ~ 181660 (+)
G103853 NA non-coding downstream 60592 183874 ~ 184430 (+)
G103862 NA non-coding downstream 77458 200740 ~ 202233 (+)
G103864 NA non-coding downstream 80747 204029 ~ 204844 (+)
G103865 NA non-coding downstream 81781 205063 ~ 206020 (+)
G103851 NA other downstream 51714 174996 ~ 181022 (+)
G104092 NA other downstream 566764 690046 ~ 701271 (+)
G104761 NA other downstream 1029779 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1185996 1309202 ~ 1390936 (+)

Expression


Co-expression Network