G103871


Basic Information

Item Value
gene id G103871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 220066 ~ 222075 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116542
AGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTATCATACCagtctctagtgttactataaTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTAAAATACCAGTCTCTAGTGTTACTACAATACTAGTCTCTATGGTGTTACTATAATACCAGTCACTAGTGTTACTACAATACCAGTCTCTTGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTATAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAACACCAGTCTCTAGTGTTACTACCACTCTCTAGTGTTACTACAATACCAGTCTCTGTTGTTACTATAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTATCATACCagtctctagtgttactataaTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTTTTACTACGATACCAGTCTCTAGTGTTACCATAATACCAGTCTCTAGTGTTACTACCAGTCTCTAAAATGTTTCTTCAGTCTTTATATCTCACTGAGCTGCTTTCTCTGCAACAGAAATAAACAGTTTCCATAGCATCTTATATACCACAATGCAATACAATGGCAGGTCAGACAGAAACCGTTTTCCAATGCATCTTATATCCCACAATGCAATACAATGGCAGGTCAGACAGAAACCGTTTTCCAATGCATCTTATATCCCACAATGCAATACAATGGCAGGTCAGACAGAAACCGTTTTCCAAT
>TU116544
AGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACaaTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTAAAATACCAGTCTCTAGTGTTACTACAATACTAGTCTCTATGGTGTTACTATAATACCAGTCACTAGTGTTACTACAATACCAGTCTCTTGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTATAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAACACCAGTCTCTAGTGTTACTACCACTCTCTAGTGTTACTACAATACCAGTCTCTGTTGTTACTATAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTATCATACCagtctctagtgttactataaTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTTTTACTACGATACCAGTCTCTAGTGTTACCATAATACCAGTCTCTAGTG
>TU116545
AGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTATCATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTATCATACCagtctctagtgttactataaTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACCAGTCTCTAGTGTTACTACAACACCAGTCTCTAGTGTTACTACCACTCTCTAGTGTTACTACAATACCAGTCTCTGTTGTTACTATAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTATCATACCagtctctagtgttactataaTACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTGTTACTACAATACCAGTCTCTAGTTTTACTACGATACCAGTCTCTAGTGTTACCATAATACCAGTCTCTAGTG

Function

NR:

description
PREDICTED: cell wall protein DAN4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116542 False 990 lncRNA 0.43 6 220066 222075
TU116544 False 689 lncRNA 0.37 4 220066 221677
TU116545 True 737 lncRNA 0.45 4 220066 221677

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 201970 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 492655 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 502716 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 638384 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 683501 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 746541 968616 ~ 969528 (+)
G103867 NA non-coding upstream 10359 208906 ~ 209707 (+)
G103865 NA non-coding upstream 14046 205063 ~ 206020 (+)
G103864 NA non-coding upstream 15222 204029 ~ 204844 (+)
G103862 NA non-coding upstream 17833 200740 ~ 202233 (+)
G103853 NA non-coding upstream 35636 183874 ~ 184430 (+)
G103878 NA non-coding downstream 14276 236351 ~ 237556 (+)
G103886 NA non-coding downstream 27544 249619 ~ 250550 (+)
G103887 NA non-coding downstream 29029 251104 ~ 253123 (+)
G103891 NA non-coding downstream 44071 266146 ~ 267256 (+)
G103893 NA non-coding downstream 48950 271025 ~ 271954 (+)
G103851 NA other upstream 39044 174996 ~ 181022 (+)
G104092 NA other downstream 467971 690046 ~ 701271 (+)
G104761 NA other downstream 930986 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1087203 1309202 ~ 1390936 (+)
G105036 NA other downstream 1476998 1699073 ~ 1700431 (+)

Expression


Co-expression Network