G103878


Basic Information

Item Value
gene id G103878
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 236351 ~ 237556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116552
tgtctgttatcaTCTGATGATTATAGTTCTACCATTAATCCCTCTGTTGATTGTAGTTCTACCATTAATCTCTCTGTTGGTTATCATCTGATGATTATAGCTCCACCATTAATCCCTCTGTTGGTTATCATCTGATGATTATAGTTCTACCATTAATCCCTCTGTTGGTTATCATCTGATGATTATAGCTCCACCATTAATCCCTCTGTTGGTTATCATCTGATGATTATAGCTCCACCATTAATCCATCTGTTGGTTATCATCTGATGATTATAGCTTCACCATTAATCCCTCTGTCGGTTATCATCTGATGATTATAGCTCCACCATTAATCCCTCTGTCGGTTATCATCTGATGATTATAGTTCTACCAttaatctctctgtctgttatcaTCTGATGATTATAGCTCCACCATTAATCCCTCTGTCTGTTATCATCTGATGATTATAGTTCTACCATTAATCCATCTGTCCGTTATCATCTGATGATTATAGCTTCACCATTAATCCCTCTGTCGGTTATCATCTGATGATTATAGTTCCACCATTAATCCATCTGTCCGTTATCATCTGTTATCAGATCAGACTCGTGGACGTGGCAGAAATCCAACCCAAATAAAAACTCCTAGACGTAATCATAGACAATACACATGTAATATCTCGTGACAGACAGTCCAGATAGCTAGTGCACACAAGATTCAATTCTGCTTTTGGAGAGATTTATTGATACGAGACAGAAATGTGTCTCCTGCTTTTTACCCCAAAAACCTCTTTCCGAGATAAACACACAGAAGCTCCCAGAAGGCTGTAGACGACACGTAGTAAATACATTAACTGTATAGAAATGAAGACCTGTGAGAACTGTGGACGGGTTACAGAGAACGAGCAGTGGAAAGAAcgactgtttctgtctctctgccagtAAACTTTATGATTTAGGTTTTCAAACGTGTTCTTCACAGACAGCAGTTTCACTCTAAGAGGAAACGTGGTTCTAGGgacgtgtccccccccccccaaaaaaacaacaccatattccctatgtagtgcactgctttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116552 True 1060 lncRNA 0.37 2 236351 237556

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 218255 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 477174 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 487235 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 622903 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 668020 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 731060 968616 ~ 969528 (+)
G103871 NA non-coding upstream 14276 220066 ~ 222075 (+)
G103867 NA non-coding upstream 26644 208906 ~ 209707 (+)
G103865 NA non-coding upstream 30331 205063 ~ 206020 (+)
G103864 NA non-coding upstream 31507 204029 ~ 204844 (+)
G103862 NA non-coding upstream 34118 200740 ~ 202233 (+)
G103886 NA non-coding downstream 12063 249619 ~ 250550 (+)
G103887 NA non-coding downstream 13548 251104 ~ 253123 (+)
G103891 NA non-coding downstream 28590 266146 ~ 267256 (+)
G103893 NA non-coding downstream 33469 271025 ~ 271954 (+)
G103894 NA non-coding downstream 36284 273840 ~ 275586 (+)
G103851 NA other upstream 55329 174996 ~ 181022 (+)
G104092 NA other downstream 452490 690046 ~ 701271 (+)
G104761 NA other downstream 915505 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1071722 1309202 ~ 1390936 (+)
G105036 NA other downstream 1461517 1699073 ~ 1700431 (+)

Expression


Co-expression Network