G103887


Basic Information

Item Value
gene id G103887
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 251104 ~ 253123 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116564
tatagtagtgtttcccagtcctggattatagatgtatgactgtatagtagtgtttcccagtcctgAATTATAGATGTATGACTTTATAGTAGTgtttcccagtcccagtcctGGATTATAGATGTCtgactgtatagtagtgtttcccagtcctggtcctggattatagatgtctgactgtatagtagtgtttctCAGTCCTGGATTATAGATGTATGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116564 True 220 lncRNA 0.39 2 251104 253123

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 233008 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 461607 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 471668 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 607336 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 652453 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 715493 968616 ~ 969528 (+)
G103886 NA non-coding upstream 554 249619 ~ 250550 (+)
G103878 NA non-coding upstream 13548 236351 ~ 237556 (+)
G103871 NA non-coding upstream 29029 220066 ~ 222075 (+)
G103867 NA non-coding upstream 41397 208906 ~ 209707 (+)
G103865 NA non-coding upstream 45084 205063 ~ 206020 (+)
G103891 NA non-coding downstream 13023 266146 ~ 267256 (+)
G103893 NA non-coding downstream 17902 271025 ~ 271954 (+)
G103894 NA non-coding downstream 20717 273840 ~ 275586 (+)
G103921 NA non-coding downstream 77915 331038 ~ 331370 (+)
G103924 NA non-coding downstream 80144 333267 ~ 333825 (+)
G103851 NA other upstream 70082 174996 ~ 181022 (+)
G104092 NA other downstream 436923 690046 ~ 701271 (+)
G104761 NA other downstream 899938 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1056155 1309202 ~ 1390936 (+)
G105036 NA other downstream 1445950 1699073 ~ 1700431 (+)

Expression


Co-expression Network