G103891


Basic Information

Item Value
gene id G103891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 266146 ~ 267256 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116571
GGGGCCATACatgtacatgttgtgtttatatttttgttcagttgtaGTTGCACAGGACCTACAGAGATGAGCACAGGGACAATGAAGACCAAAAAGAATTGACAACCTTTAGAAAAATGGAAATCACTTGCAAACCACTTCAGTAAAGAGgcaattttatttaacctttatttatttaactaggcaagtcagttaaagaacaaattacataatgtaaaaagaTGTGCAGGCTAAACGCCATTTTATGTTGATTAGCTCAATTTAAATCCAAGCTACTATACTATTTTTCATTGGGCCATACATGTACATTGAAGTATTATTTCCAGTTGTCGCTATGACAATGAACACACCCTGATATCACTGAATGGTCTGACTCAGTATCTGTGAGATAGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGAGACTGAATGGTCTGAGTCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACGGAATGGTCTGAATCAGTATCTGTGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGATGGAATGGTCTGAATCAGTATCTGTGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACGGAATGGTCTGAATCAGTATCTGTGAGACTGAATGGTCTGAATCAGCATCTGTGCACTAGAGATGGAATGGTCTGAATCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGCACTAGAGACTGAATGGTCTGAATCAGTATCTGTGAGACTGAATGGTCTGAATCAGTATCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116571 True 948 lncRNA 0.40 2 266146 267256

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 248050 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 447474 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 457535 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 593203 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 638320 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 701360 968616 ~ 969528 (+)
G103887 NA non-coding upstream 13023 251104 ~ 253123 (+)
G103886 NA non-coding upstream 15596 249619 ~ 250550 (+)
G103878 NA non-coding upstream 28590 236351 ~ 237556 (+)
G103871 NA non-coding upstream 44071 220066 ~ 222075 (+)
G103867 NA non-coding upstream 56439 208906 ~ 209707 (+)
G103893 NA non-coding downstream 3769 271025 ~ 271954 (+)
G103894 NA non-coding downstream 6584 273840 ~ 275586 (+)
G103921 NA non-coding downstream 63782 331038 ~ 331370 (+)
G103924 NA non-coding downstream 66011 333267 ~ 333825 (+)
G103947 NA non-coding downstream 106421 373677 ~ 373962 (+)
G103851 NA other upstream 85124 174996 ~ 181022 (+)
G104092 NA other downstream 422790 690046 ~ 701271 (+)
G104761 NA other downstream 885805 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 1042022 1309202 ~ 1390936 (+)
G105036 NA other downstream 1431817 1699073 ~ 1700431 (+)

Expression


Co-expression Network