G103947


Basic Information

Item Value
gene id G103947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 373677 ~ 373962 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116641
cactgtacatagaaatgtctttattctttcggaacatttgtgagtgtaatgttttactgtacattttttattgattatttcacttctgtttattatctatttcacttgctttggcaatgtaaacatatgtttcctatgccaataaagccccttaaattgaaattgagagagagagagagagaaacacgagagagagagaaagagagaaagagagagagacagagagagagagagagagagagagagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116641 True 249 lncRNA 0.35 2 373677 373962

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 355581 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 340768 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 350829 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 486497 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 531614 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 594654 968616 ~ 969528 (+)
G103924 NA non-coding upstream 39852 333267 ~ 333825 (+)
G103921 NA non-coding upstream 42307 331038 ~ 331370 (+)
G103894 NA non-coding upstream 98091 273840 ~ 275586 (+)
G103893 NA non-coding upstream 101723 271025 ~ 271954 (+)
G103891 NA non-coding upstream 106421 266146 ~ 267256 (+)
G103960 NA non-coding downstream 38542 412504 ~ 413154 (+)
G103967 NA non-coding downstream 49357 423319 ~ 442300 (+)
G103966 NA non-coding downstream 51340 425302 ~ 426695 (+)
G103965 NA non-coding downstream 63522 437484 ~ 444272 (+)
G103977 NA non-coding downstream 76804 450766 ~ 453776 (+)
G103851 NA other upstream 192655 174996 ~ 181022 (+)
G104092 NA other downstream 316084 690046 ~ 701271 (+)
G104761 NA other downstream 779099 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 935316 1309202 ~ 1390936 (+)
G105036 NA other downstream 1325111 1699073 ~ 1700431 (+)

Expression


Co-expression Network