G104047


Basic Information

Item Value
gene id G104047
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 587297 ~ 587671 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116780
aacacacacactacagaacCAGCCTGTCTGTCAGGGATGTCAATGGGGGGGGTTTATTATTGTTTTTTCAAGTAAAGAAATAAAGAACACACACCTTTTGGTGAGGTGTTGACTAATGAACGACATATTAAACTGTTCCCTTTTGGTGAGGTGTTGACAGATTAAACTGTCTCCCTTTTGGTGAGGTGTTGACAGATTAAACTGTCTCCCTTTTGGTGAGGTGTTGACTAATGAATGACAGATTAAACTGTCTCCTTTTggtgaggtgctgactaatgAACGACAGATTAAACTGTCCCCTTTTggtgaggtgctgactaatgAACGACAGATTAAACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116780 True 340 lncRNA 0.41 2 587297 587671

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 569201 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 127059 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 137120 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 272788 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 317905 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 380945 968616 ~ 969528 (+)
G104044 NA non-coding upstream 2282 582235 ~ 585015 (+)
G104033 NA non-coding upstream 18747 568134 ~ 568550 (+)
G104024 NA non-coding upstream 36851 549708 ~ 550446 (+)
G104006 NA non-coding upstream 78303 508715 ~ 508994 (+)
G104005 NA non-coding upstream 78675 506726 ~ 508622 (+)
G104049 NA non-coding downstream 6686 594357 ~ 595015 (+)
G104051 NA non-coding downstream 15839 603510 ~ 603948 (+)
G104060 NA non-coding downstream 30636 618307 ~ 618853 (+)
G104067 NA non-coding downstream 45103 632774 ~ 633339 (+)
G104072 NA non-coding downstream 53105 640776 ~ 643494 (+)
G103851 NA other upstream 406275 174996 ~ 181022 (+)
G104092 NA other downstream 102375 690046 ~ 701271 (+)
G104761 NA other downstream 565390 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 721607 1309202 ~ 1390936 (+)
G105036 NA other downstream 1111402 1699073 ~ 1700431 (+)

Expression


Co-expression Network