G104049


Basic Information

Item Value
gene id G104049
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 594357 ~ 595015 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116783
GAGTAGAGGACTCCATATTCCCTATACAAATCACTACTTTTCACTAGAGTAGTGGACTCCATAGTCCCTATACAAAGCACTACTTTTCACTAGAGTAGTGGACTCCATATTCCCTATACAAAGCACTACGTGTCACTAGAGTAGTGGACTCCATATTCCCTACACAAAGCACTACTTTTCACTAGAGTAGTGGACTCCATATTCCCTATACAAAACACTACTTTTCACTAGAGTAGTGGACTCCATATTTCCTATACAAAGCACTACTTTTCACTAGAGTAGTGGACTCCATATTCCCTATACAAAGCACTACTTTTCACTAGAGTAGTGGAACACTACGTTTCACTAGAGTAGTGGAACACTACGTTTCACTAGAGTAGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116783 True 383 lncRNA 0.40 3 594357 595015

Neighbor

gene id symbol gene type direction distance location
LOC118936272 LOC106596174 coding upstream 576261 13864 ~ 18096 (+)
zgc:110410 LOC106594189 coding downstream 119715 714730 ~ 722393 (+)
LOC118937316 LOC106573240 coding downstream 129776 724791 ~ 731551 (+)
cmc1 cc068 coding downstream 265444 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 310561 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 373601 968616 ~ 969528 (+)
G104047 NA non-coding upstream 6686 587297 ~ 587671 (+)
G104044 NA non-coding upstream 9342 582235 ~ 585015 (+)
G104033 NA non-coding upstream 25807 568134 ~ 568550 (+)
G104024 NA non-coding upstream 43911 549708 ~ 550446 (+)
G104006 NA non-coding upstream 85363 508715 ~ 508994 (+)
G104051 NA non-coding downstream 8495 603510 ~ 603948 (+)
G104060 NA non-coding downstream 23292 618307 ~ 618853 (+)
G104067 NA non-coding downstream 37759 632774 ~ 633339 (+)
G104072 NA non-coding downstream 45761 640776 ~ 643494 (+)
G103840 NA non-coding downstream 80999 676014 ~ 676375 (+)
G103851 NA other upstream 413335 174996 ~ 181022 (+)
G104092 NA other downstream 95031 690046 ~ 701271 (+)
G104761 NA other downstream 558046 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 714263 1309202 ~ 1390936 (+)
G105036 NA other downstream 1104058 1699073 ~ 1700431 (+)

Expression


Co-expression Network