G104128


Basic Information

Item Value
gene id G104128
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 778189 ~ 779730 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU116924
GCTTTAAACAGTTAAAAGGTGTTTTATATAGTTAAAAGGTGCTCCACACAGCATAACCATAGTGGTGAATAACTCCCATTTGAAAAGCCATTGAAAACAAAGAGGGGAAAACAATCCCCATTTCTAATACTTGACAAGTCATCTTTTAAAAACAATCCCCATTTCTAATACTTGACAAGTCATCTTTTAAAAACAATCCCCATTTCTAATACTTGACAAGTCATCTTTTAAAAACAATCCCCATTTCTAATACTTGACAAGTCATCTTTTAAAAACAATCCCCATTTCTAATACTTGACAAGTCATCTTTTAAAAACAATCCCCATTTCTAATACTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU116924 True 338 lncRNA 0.38 2 778189 779730

Neighbor

gene id symbol gene type direction distance location
LOC118937316 LOC106573240 coding upstream 52214 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 55796 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 105995 149182 ~ 672194 (+)
LOC118936272 LOC106596174 coding upstream 760093 13864 ~ 18096 (+)
cmc1 cc068 coding downstream 80729 860459 ~ 872515 (+)
LOC110506977 LOC106595099 coding downstream 125846 905576 ~ 908576 (+)
LOC118936923 NA coding downstream 188886 968616 ~ 969528 (+)
rbms3 rbms3 coding downstream 243731 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 442400 1222130 ~ 1224904 (+)
G104116 NA non-coding upstream 20418 756786 ~ 757771 (+)
G104114 NA non-coding upstream 23861 753699 ~ 754328 (+)
G104111 NA non-coding upstream 29913 746396 ~ 748276 (+)
G104106 NA non-coding upstream 36636 740962 ~ 741553 (+)
G104138 NA non-coding downstream 98329 878059 ~ 878664 (+)
G104179 NA non-coding downstream 107232 886962 ~ 897406 (+)
G104181 NA non-coding downstream 129328 909058 ~ 911619 (+)
G104183 NA non-coding downstream 132063 911793 ~ 912016 (+)
G104184 NA non-coding downstream 132863 912593 ~ 912844 (+)
G104092 NA other upstream 76918 690046 ~ 701271 (+)
G103851 NA other upstream 597167 174996 ~ 181022 (+)
G104761 NA other downstream 373331 1153061 ~ 1153749 (+)
tgfbr2b LOC106606173 other downstream 529548 1309202 ~ 1390936 (+)
G105036 NA other downstream 919343 1699073 ~ 1700431 (+)
G105042 NA other downstream 929239 1708969 ~ 1710557 (+)

Expression


Co-expression Network