XLOC_020765


Basic Information

Item Value
gene id XLOC_020765
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 4853062 ~ 4853815 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042304
CAAACTCTGTTCTGCAGGTGGAGTTCATTATCGTTATAGGAGTGAGGAAGGAACAGTCACTCTGAGATCTGGTGTCACTGAACTGAAGAATGATGATCAGATTCAGTGGAGGTTTGGAAATGAAGAGACTTTAATAGCAGAAATCAATGAACAGACCAACAGATTCTCTGTATTTGATGATGTTCTTGAtgggagattcagagacagactgacACTGGACAATgaaactggatctctgaccatcacagaCATCAGAACTAAACATGCTGGAGTTTATAAAGCACAGACCAACAATGAAACTATCTCTATTAAACTCAAAGTTGATACAGACGTTAAAGAAGTGTCTGTGAAAATGAGGAATTCAGTCACTCTGAGCTCTGGTGTTACTGACATGATGAATGATGATCAGATTAAGTGGAGGTTTGAATCTAAAGAAATTGCTGAGGTTAATGTTACAGCTGGCAGATTCTCTGTATTTGATGATGTTCTTGGtgggagattcagagacagactgaaacTGGACAAGAAAACTGGATCTCTGATCATCACAGACATCAGAACTGAACATGCTGGAG

Function

GO:

id name namespace
GO:0042692 muscle cell differentiation biological_process
GO:0048731 system development biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0007517 muscle organ development biological_process
GO:0030154 cell differentiation biological_process
GO:0048513 animal organ development biological_process
GO:0007275 multicellular organism development biological_process
GO:0009653 anatomical structure morphogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0048869 cellular developmental process biological_process
GO:0048646 anatomical structure formation involved in morphogenesis biological_process
GO:0061061 muscle structure development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0030903 notochord development biological_process

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042304 True 575 lncRNA 0.40 2 4853062 4853815

Neighbor

gene id symbol gene type direction distance location
XLOC_020761 CU570881.2 coding downstream 39717 4782287 ~ 4813345 (-)
XLOC_020763 zgc:195170 coding downstream 54324 4797508 ~ 4798738 (-)
XLOC_020762 CU570881.1 coding downstream 68404 4783644 ~ 4784658 (-)
XLOC_020759 calr3a coding downstream 83922 4762478 ~ 4769140 (-)
XLOC_020758 rad23ab coding downstream 92875 4745105 ~ 4760187 (-)
XLOC_020766 CU207311.2 coding upstream 8822 4862637 ~ 4864036 (-)
XLOC_020767 si:ch73-256j6.6 coding upstream 14633 4868448 ~ 4872418 (-)
XLOC_020768 si:ch73-256j6.4 coding upstream 31165 4884980 ~ 4892937 (-)
XLOC_020769 si:ch73-256j6.3 coding upstream 55098 4908913 ~ 4913031 (-)
XLOC_020770 si:ch73-256j6.2 coding upstream 72962 4926777 ~ 4931063 (-)
XLOC_020756 NA non-coding downstream 117725 4733007 ~ 4735337 (-)
XLOC_020752 CU074310.1 non-coding downstream 539944 4311803 ~ 4313118 (-)
XLOC_020750 NA non-coding downstream 966378 3883607 ~ 3886684 (-)
XLOC_020749 NA non-coding downstream 1111778 3740586 ~ 3741284 (-)
XLOC_020747 NA non-coding downstream 1505178 3347513 ~ 3347884 (-)
XLOC_020777 CR936300.1 non-coding upstream 286715 5140530 ~ 5145022 (-)
XLOC_020780 NA non-coding upstream 413708 5267523 ~ 5274962 (-)
XLOC_020781 NA non-coding upstream 459156 5312971 ~ 5315589 (-)
XLOC_020784 NA non-coding upstream 599428 5453243 ~ 5463115 (-)
XLOC_020788 NA non-coding upstream 770558 5624373 ~ 5631081 (-)

Expression


Co-expression Network