G104181


Basic Information

Item Value
gene id G104181
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 909058 ~ 911619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117002
CAGTATGGTGCAGGATAATGTGCTGTATATAGCAGTATGGAGcaggataatgtactgtatatatcagtATGGAGCAggacaatgtactgtatatagcagtATGGTGCAggataatgtactgtatatagcagtATGGTGcaggataatgtactgtatatagcaggataatgtactgtatatagcagtATGGCGcaggataatgtactgtatatagcaggataaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117002 True 225 lncRNA 0.38 3 909058 911619

Neighbor

gene id symbol gene type direction distance location
LOC110506977 LOC106595099 coding upstream 482 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 36544 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 183083 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 186665 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 236864 149182 ~ 672194 (+)
LOC118936923 NA coding downstream 56997 968616 ~ 969528 (+)
rbms3 rbms3 coding downstream 111842 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 310511 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 397583 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 512697 1424316 ~ 1426453 (+)
G104179 NA non-coding upstream 11652 886962 ~ 897406 (+)
G104138 NA non-coding upstream 30394 878059 ~ 878664 (+)
G104128 NA non-coding upstream 129328 778189 ~ 779730 (+)
G104116 NA non-coding upstream 151287 756786 ~ 757771 (+)
G104114 NA non-coding upstream 154730 753699 ~ 754328 (+)
G104183 NA non-coding downstream 174 911793 ~ 912016 (+)
G104184 NA non-coding downstream 974 912593 ~ 912844 (+)
G104185 NA non-coding downstream 2564 914183 ~ 914388 (+)
G104186 NA non-coding downstream 3119 914738 ~ 915183 (+)
G104187 NA non-coding downstream 5061 916680 ~ 917640 (+)
G104092 NA other upstream 207787 690046 ~ 701271 (+)
G103851 NA other upstream 728036 174996 ~ 181022 (+)
G104761 NA other downstream 241442 1153061 ~ 1153749 (+)
G105036 NA other downstream 787454 1699073 ~ 1700431 (+)
G105042 NA other downstream 797350 1708969 ~ 1710557 (+)
G106019 NA other downstream 1609097 2520716 ~ 2527972 (+)

Expression


Co-expression Network