G104186


Basic Information

Item Value
gene id G104186
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 914738 ~ 915183 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117007
ttataacagacaggatggggaGGGACCAAGccaatactgtatattataacagacaggatggggaGGGACCAAGCCAATACTGTATAAtataacagacaggatggggaGGGACCAAACCAATACTGTATATTATGACAGGGTGATGATGGACCAAACCAATACTGTATAACAGACAGGGTGGTGATGGACCAAACCAATACTGTATAACAGACAGGGTGGTGATGGACCAAACCAATATTGTATAACAGACAGGGTGGTGATGGACCAAAccaatactgtatattataacagacaAGGTGGTGATGGACCAAACCAATACTGTATAATATGACAGGGTGGTGATGGACCAAACCAATACTGTATAATATGACAGGGTGGTGATGGACCAAACCAATACTGTATAATATGACAGGGTGGTGATGGACCAAACCAATACTGTATAATAT

Function

NR:

description
PREDICTED: brain-enriched guanylate kinase-associated protein isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117007 True 446 lncRNA 0.43 1 914738 915183

Neighbor

gene id symbol gene type direction distance location
LOC110506977 LOC106595099 coding upstream 6162 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 42224 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 188763 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 192345 714730 ~ 722393 (+)
LOC110512917 csmd3 coding upstream 242544 149182 ~ 672194 (+)
LOC118936923 NA coding downstream 53433 968616 ~ 969528 (+)
rbms3 rbms3 coding downstream 108278 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 306947 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 394019 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 509133 1424316 ~ 1426453 (+)
G104185 NA non-coding upstream 350 914183 ~ 914388 (+)
G104184 NA non-coding upstream 1894 912593 ~ 912844 (+)
G104183 NA non-coding upstream 2722 911793 ~ 912016 (+)
G104181 NA non-coding upstream 3119 909058 ~ 911619 (+)
G104179 NA non-coding upstream 17332 886962 ~ 897406 (+)
G104187 NA non-coding downstream 1497 916680 ~ 917640 (+)
G104192 NA non-coding downstream 10854 926037 ~ 926363 (+)
G104640 NA non-coding downstream 19411 934594 ~ 934798 (+)
G104647 NA non-coding downstream 29083 944266 ~ 944470 (+)
G104654 NA non-coding downstream 37724 952907 ~ 953167 (+)
G104092 NA other upstream 213467 690046 ~ 701271 (+)
G103851 NA other upstream 733716 174996 ~ 181022 (+)
G104761 NA other downstream 237878 1153061 ~ 1153749 (+)
G105036 NA other downstream 783890 1699073 ~ 1700431 (+)
G105042 NA other downstream 793786 1708969 ~ 1710557 (+)
G106019 NA other downstream 1605533 2520716 ~ 2527972 (+)

Expression


Co-expression Network