G104690


Basic Information

Item Value
gene id G104690
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1008879 ~ 1009114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117743
tagtgagacagcttgatgtaccaggacaccccctggacaggacactagtctatctcctgttactgtagtgagacagcttgatgtaccaggacaccccctggacaggacactagtctatcccCTGTTtctgatgtacaggacacccctggacaggacactagtctatctcctgttactgtagtgtgagacagcttgatgtaccaggacaccccctggacaggacactagtctatctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117743 True 236 lncRNA 0.38 1 1008879 1009114

Neighbor

gene id symbol gene type direction distance location
LOC118936923 NA coding upstream 39351 968616 ~ 969528 (+)
LOC110506977 LOC106595099 coding upstream 100303 905576 ~ 908576 (+)
cmc1 cc068 coding upstream 136365 860459 ~ 872515 (+)
LOC118937316 LOC106573240 coding upstream 282904 724791 ~ 731551 (+)
zgc:110410 LOC106594189 coding upstream 286486 714730 ~ 722393 (+)
rbms3 rbms3 coding downstream 14347 1023461 ~ 1231535 (+)
LOC110515032 LOC106606177 coding downstream 213016 1222130 ~ 1224904 (+)
tgfbr2b LOC106606173 coding downstream 300088 1309202 ~ 1390936 (+)
LOC118937323 NA coding downstream 415202 1424316 ~ 1426453 (+)
stt3b stt3b coding downstream 447222 1456336 ~ 1564305 (+)
G104685 NA non-coding upstream 14979 993601 ~ 993900 (+)
G104684 NA non-coding upstream 16208 992465 ~ 992671 (+)
G104681 NA non-coding upstream 22251 986262 ~ 986628 (+)
G104677 NA non-coding upstream 26706 981926 ~ 982173 (+)
G104676 NA non-coding upstream 27064 981590 ~ 981815 (+)
G104711 NA non-coding downstream 18517 1027631 ~ 1028148 (+)
G104716 NA non-coding downstream 22930 1032044 ~ 1034766 (+)
G104722 NA non-coding downstream 38472 1047586 ~ 1048146 (+)
G104730 NA non-coding downstream 57466 1066580 ~ 1067219 (+)
G104746 NA non-coding downstream 101063 1110177 ~ 1111073 (+)
G104092 NA other upstream 307608 690046 ~ 701271 (+)
G103851 NA other upstream 827857 174996 ~ 181022 (+)
G104761 NA other downstream 143947 1153061 ~ 1153749 (+)
G105036 NA other downstream 689959 1699073 ~ 1700431 (+)
G105042 NA other downstream 699855 1708969 ~ 1710557 (+)
G106019 NA other downstream 1511602 2520716 ~ 2527972 (+)

Expression


Co-expression Network