G104807


Basic Information

Item Value
gene id G104807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 1030898 ~ 1034080 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU117903
tccctacaacactattccctacaacactattccctacaacactattccctataacactattccccacaacactattctatactaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccccacaacactattctatactaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccccacAACactattccccactattccccacaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccctacaacactattccctacaactctattccctacaacactattccccacaacactattccccacaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacgctattccctacaacactattccctacaactctattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccccacaacactattccccacaacactattccctacaacactattccctacaacactattccccacaacactattccccacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccctataacACTATT
>TU117900
tccctacaacactattccctacaacactattccctacaacactattccctataacactattccccacaacactattctatactaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccccacaacactattctatactaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccccactattccctacaacactattccccacaacactattccctacaacactattccctacaacactattccctacaacactattccctacaactctat
>TU117901
tccctacaacactattccctacaacactattccctacaacactattccctataacactattccccacaacactattctatactaacactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccccacaacactattctatactaacactattccctacaacactattccctacaacactattccctacaacactattccccacaacactattccctacaacactattccccacAACACTATTCcccactattccctacaacactattccctacaacactattccctacaacactattccctacaacactattccc

Function

NR:

description
PREDICTED: ventricular zone-expressed PH domain-containing protein-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU117903 False 988 lncRNA 0.41 2 1030898 1034080
TU117900 False 387 lncRNA 0.38 2 1032009 1034080
TU117901 True 376 lncRNA 0.40 2 1033590 1034080

Neighbor

gene id symbol gene type direction distance location
azi2 azi2 coding downstream 125480 879818 ~ 905418 (-)
eomesb eomesb coding downstream 217708 806150 ~ 813190 (-)
LOC110516483 LOC106573240 coding downstream 240027 727654 ~ 790871 (-)
LOC118937315 NA coding downstream 354386 672497 ~ 676512 (-)
LOC118937314 NA coding downstream 522829 423319 ~ 508560 (-)
LOC118937319 NA coding upstream 281584 1314565 ~ 1316245 (-)
LOC110515934 gadl1 coding upstream 393171 1427251 ~ 1457133 (-)
LOC110515405 LOC106590999 coding upstream 539322 1573402 ~ 1683489 (-)
kiaa1143 k1143 coding upstream 668871 1702951 ~ 1704863 (-)
zdhhc3a zdhhc3 coding upstream 675436 1709516 ~ 1732333 (-)
G104699 NA non-coding downstream 14132 1016420 ~ 1016766 (-)
G104693 NA non-coding downstream 19219 1010178 ~ 1011679 (-)
G104694 NA non-coding downstream 20064 1010333 ~ 1010834 (-)
G104691 NA non-coding downstream 21782 1008881 ~ 1009116 (-)
G104689 NA non-coding downstream 23971 1006252 ~ 1006927 (-)
G104817 NA non-coding upstream 18448 1052528 ~ 1053486 (-)
G104821 NA non-coding upstream 29906 1063986 ~ 1065000 (-)
G104823 NA non-coding upstream 32483 1066563 ~ 1067207 (-)
G104825 NA non-coding upstream 36236 1070316 ~ 1070930 (-)
G104827 NA non-coding upstream 38784 1072864 ~ 1073877 (-)
G105220 NA other upstream 299906 1333986 ~ 1342335 (-)
G105285 NA other upstream 506650 1540730 ~ 1541706 (-)
G105340 NA other upstream 607187 1641267 ~ 1641732 (-)
G105427 NA other upstream 878512 1912592 ~ 1917188 (-)

Expression

G104807 Expression in all Baseline Samples

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G104807 Expression in each Bioproject

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G104807 Expression in each Sample
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Co-expression Network