XLOC_020769 (si:ch73-256j6.3)


Basic Information

Item Value
gene id XLOC_020769
gene name si:ch73-256j6.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 4908913 ~ 4913031 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040956
GGGAGATTCAGTTACTCTGAGGTCTGACCTCACTGATCTACAGAAGGATGATCAGATTAAATGGTTTGcatatgaagatattttaatagcAGAAATCAATGAACAGACCAACAGATTCTCTGTATTTGATGATGTTCTTGAtgggagattcagagacagactgaaactggacaagaaaactggatctctgaccatcacagaCATCACAACTGAACATACTGGAGTTTATAAACTACAGAACAAAGAGATTATCCTCAGGGCAGTCTATCTTATTGTCTATGTCACTCTGAGCTCTGGTGTTACCAAAATAAAGGATGATGATCAGATTCAGTGGAGGTTTGGAACAAAAGAGACTTTAATAGCAGAAATCAATAAACAGACCAACAGATTCTCTGTATTTGATGATGTTCTTGAtgggagattcagagacagactgaaactggacaataaaactggatctctgaccatcacagaCACCAGAACTGAACATGCTGGAGTTTATAAAGCACAAACCAACAATAAAATCTACACTGTGAAACTTGCACTTTGGAAAGAGAATAAAGTGTTTGTGGAAATGGGGGATTCAGTCACTCTGAACACTGATTATATTAACATCATGAATGATGATCGGGTTCAGTGGAGGTTTGGAGATGGAGACACTTTAATAGCAGAATTCAATGAACATACTAACAGATTCTCTGTATTTGATGATGTTCTTGAtgggagattcagagacagactgaaactggacaagaaaactggatctctgaccattaCAAACATCACAGCTGAACATGGTGGAGTTTATAAACTACAGACCAACACTGAAGTCAACTCTGTTACACTCGAAGTGAACAGGAAGGAAGTGTCTGTGAAAACAGGAGAGTCAGTCACTTTGCACACTGGTTTCACTGAAATTAAGGATGATGATCTGATTCAGTGGAGGTTTGCAAATATCCACTCACTGATAGctgaaatcaataaacaaaccaaCAGATTCTCGGTATTTGCTGATGGTCCTGAtgggagattcagagacagactgaaactggacaagaaaactggatctctgaccatcacagaCACCAGAACTGAACATGCTGGACGTTATAAACTACAGAGCGACTATCTTCATATTTCTTTCTATCTCACTGTCTTTGGTGAGTTACAATTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000094604

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040956 True 1174 mRNA 0.39 4 4908913 4913031

Neighbor

gene id symbol gene type direction distance location
XLOC_020764 si:ch73-256j6.4 coding downstream 9619 4819410 ~ 4899294 (-)
XLOC_020768 si:ch73-256j6.4 coding downstream 15976 4884980 ~ 4892937 (-)
XLOC_020767 si:ch73-256j6.6 coding downstream 36495 4868448 ~ 4872418 (-)
XLOC_020760 si:ch73-256j6.5 coding downstream 40592 4772860 ~ 4868321 (-)
XLOC_020770 si:ch73-256j6.2 coding upstream 13746 4926777 ~ 4931063 (-)
XLOC_020771 pku300 coding upstream 26528 4939559 ~ 4944795 (-)
XLOC_020772 cherp coding upstream 49339 4962370 ~ 4990045 (-)
XLOC_020773 rx1 coding upstream 84753 4997784 ~ 5006801 (-)
XLOC_020774 matk coding upstream 123148 5036179 ~ 5054773 (-)
XLOC_020765 NA non-coding downstream 55098 4853062 ~ 4853815 (-)
XLOC_020756 NA non-coding downstream 173576 4733007 ~ 4735337 (-)
XLOC_020752 CU074310.1 non-coding downstream 595795 4311803 ~ 4313118 (-)
XLOC_020750 NA non-coding downstream 1022229 3883607 ~ 3886684 (-)
XLOC_020749 NA non-coding downstream 1167629 3740586 ~ 3741284 (-)
XLOC_020777 CR936300.1 non-coding upstream 227499 5140530 ~ 5145022 (-)
XLOC_020780 NA non-coding upstream 354492 5267523 ~ 5274962 (-)
XLOC_020781 NA non-coding upstream 399940 5312971 ~ 5315589 (-)
XLOC_020784 NA non-coding upstream 540212 5453243 ~ 5463115 (-)
XLOC_020788 NA non-coding upstream 711342 5624373 ~ 5631081 (-)

Expression


Co-expression Network