Gene
RNA
| Item | Value |
|---|---|
| gene id | G104825 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 1070316 ~ 1070930 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histidine--tRNA ligase, cytoplasmic isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU117946 | False | 365 | lncRNA | 0.43 | 2 | 1070316 | 1070930 |
| TU117947 | True | 262 | lncRNA | 0.39 | 2 | 1070316 | 1070930 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| azi2 | azi2 | coding | downstream | 164898 | 879818 ~ 905418 (-) |
| eomesb | eomesb | coding | downstream | 257126 | 806150 ~ 813190 (-) |
| LOC110516483 | LOC106573240 | coding | downstream | 279445 | 727654 ~ 790871 (-) |
| LOC118937315 | NA | coding | downstream | 393804 | 672497 ~ 676512 (-) |
| LOC118937314 | NA | coding | downstream | 562247 | 423319 ~ 508560 (-) |
| LOC118937319 | NA | coding | upstream | 244734 | 1314565 ~ 1316245 (-) |
| LOC110515934 | gadl1 | coding | upstream | 356321 | 1427251 ~ 1457133 (-) |
| LOC110515405 | LOC106590999 | coding | upstream | 502472 | 1573402 ~ 1683489 (-) |
| kiaa1143 | k1143 | coding | upstream | 632021 | 1702951 ~ 1704863 (-) |
| zdhhc3a | zdhhc3 | coding | upstream | 638586 | 1709516 ~ 1732333 (-) |
| G104823 | NA | non-coding | downstream | 3109 | 1066563 ~ 1067207 (-) |
| G104821 | NA | non-coding | downstream | 5316 | 1063986 ~ 1065000 (-) |
| G104817 | NA | non-coding | downstream | 16830 | 1052528 ~ 1053486 (-) |
| G104807 | NA | non-coding | downstream | 36236 | 1030898 ~ 1034080 (-) |
| G104699 | NA | non-coding | downstream | 53550 | 1016420 ~ 1016766 (-) |
| G104827 | NA | non-coding | upstream | 1934 | 1072864 ~ 1073877 (-) |
| G104838 | NA | non-coding | upstream | 39098 | 1110028 ~ 1111287 (-) |
| G104842 | NA | non-coding | upstream | 47773 | 1118703 ~ 1126657 (-) |
| G104857 | NA | non-coding | upstream | 88049 | 1158979 ~ 1159494 (-) |
| G104863 | NA | non-coding | upstream | 102404 | 1173334 ~ 1174778 (-) |
| G105220 | NA | other | upstream | 263056 | 1333986 ~ 1342335 (-) |
| G105285 | NA | other | upstream | 469800 | 1540730 ~ 1541706 (-) |
| G105340 | NA | other | upstream | 570337 | 1641267 ~ 1641732 (-) |
| G105427 | NA | other | upstream | 841662 | 1912592 ~ 1917188 (-) |
